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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC67812.1
DDBJ      :             putative IS256 family IS1245-like transposase
Swiss-Prot:             

Homologs  Archaea  3/68 : Bacteria  188/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
:192 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   3->190 PF00872 * Transposase_mut 1e-26 37.9 %
:HMM:PFM   48->184 PF00872 * Transposase_mut 9.7e-54 50.7 136/381  
:BLT:SWISS 50->184 TRA6_BURM1 4e-26 46.6 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC67812.1 GT:GENE BAC67812.1 GT:PRODUCT putative IS256 family IS1245-like transposase GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION 119461..120039 GB:FROM 119461 GB:TO 120039 GB:DIRECTION + GB:PRODUCT putative IS256 family IS1245-like transposase GB:NOTE IS256 family (119399..121219). Inverted repeat sequence (22/25 bp). Target sequence (CG). GB:PROTEIN_ID BAC67812.1 LENGTH 192 SQ:AASEQ MPLPARRAGHRATLRCERPVQRGRCRVALSQRRPGPRDPQAAVRELLPRELRSGSFFPALLERRRRIDQALYAVIMEAYVRGVSTRSVDDLVKALGVDTGISRSEVSRICQDLDGELTAFRARPLDHVRFPYIYLDAPYCKARVEHQIVSRAVVIATGITEDGGREVLGVMVGDSETEVFWTEFCVTCANAV GT:EXON 1|1-192:0| BL:SWS:NREP 1 BL:SWS:REP 50->184|TRA6_BURM1|4e-26|46.6|133/388| RP:PFM:NREP 1 RP:PFM:REP 3->190|PF00872|1e-26|37.9|182/358|Transposase_mut| HM:PFM:NREP 1 HM:PFM:REP 48->184|PF00872|9.7e-54|50.7|136/381|Transposase_mut| GO:PFM:NREP 3 GO:PFM GO:0003677|"GO:DNA binding"|PF00872|IPR001207| GO:PFM GO:0004803|"GO:transposase activity"|PF00872|IPR001207| GO:PFM GO:0006313|"GO:transposition, DNA-mediated"|PF00872|IPR001207| OP:NHOMO 1286 OP:NHOMOORG 193 OP:PATTERN -------------------------------------------------4-14--------------- ----31-E---L-9-s788-88---188888*A9-F--92---3---D---1--1-L---111---53---111142---92--------3------------2-------------------------1-------------13-9-----------------1-1-------------------2----A-----------------59-------F25-------------1----------1----5E-H------G-K--------1----1D61--2---------------------------------343----211-1----------3-111--1--P--34---4--191-4---3-1-----------------3--5---2---------------528--1E1-------13-11--2H-2---------------------H46-1--4--------------11--K------1--5---2-------26438------EE5------G-C134-4--7-2---43-----------------------3--------1----1--------3--C-1--1---2-------------------------3---4--------------4-------h---------------------4a-----1----1-----------1-------------------1--11-----1--1---2-------LKN6MNZM285-------------2-------------------1------311----3-1------11--n-1---------------------------1--89A-----------------------------------4-------1-------6----------- -1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 16-30| PSIPRED ccHHHHHHHHHHHHHHccccccccccccccccccccccccccEEEEEcccccccccccEEEcccccccHHHHHHHHHHHHHccccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEccEEEccccccEEEEEEEEEEEEEcccccEEEEEEEEEccccHHHHHHHHHHHHHcc //