[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Streptomyces avermitilis MA-4680 (save0)
Gene : BAC67813.1
DDBJ      :             putative IS256 family IS1245-like transposase
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  124/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
:169 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   3->127 PF00872 * Transposase_mut 4e-25 42.4 %
:HMM:PFM   3->133 PF00872 * Transposase_mut 2e-47 43.5 131/381  
:BLT:SWISS 4->140 TRA1_MYCTU 2e-28 46.3 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC67813.1 GT:GENE BAC67813.1 GT:PRODUCT putative IS256 family IS1245-like transposase GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION 120102..120611 GB:FROM 120102 GB:TO 120611 GB:DIRECTION + GB:PRODUCT putative IS256 family IS1245-like transposase GB:NOTE IS256 family, partial GB:PROTEIN_ID BAC67813.1 LENGTH 169 SQ:AASEQ MLGAAYQRCRVHFLRNVFSLINKEAAEMAAATIRTIFAQPTADAVRTQLDTVAGMLGKQFPKVKAMLLEAKDDLTAFAAFPERHGKKIQSTNPLERINREVKRRTDVVQVFPNDDALLRLVTAVLFELHDEWIAFPRRYLPEGSMSQLYPAELPEQAPALAHTTSTTAG GT:EXON 1|1-169:0| BL:SWS:NREP 1 BL:SWS:REP 4->140|TRA1_MYCTU|2e-28|46.3|136/415| SEG 150->161|paelpeqapala| RP:PFM:NREP 1 RP:PFM:REP 3->127|PF00872|4e-25|42.4|125/358|Transposase_mut| HM:PFM:NREP 1 HM:PFM:REP 3->133|PF00872|2e-47|43.5|131/381|Transposase_mut| GO:PFM:NREP 3 GO:PFM GO:0003677|"GO:DNA binding"|PF00872|IPR001207| GO:PFM GO:0004803|"GO:transposase activity"|PF00872|IPR001207| GO:PFM GO:0006313|"GO:transposition, DNA-mediated"|PF00872|IPR001207| OP:NHOMO 810 OP:NHOMOORG 127 OP:PATTERN -------------------------------------------------4--4--------------- ----3--A---B-4-r766-68---166666-99-F--63---4---8---1----F-----1---53-------1----92--------3--------------------------------------1-------------1-----7-----------------------------------------A------------------9-------1------------1--2--------1------5E-A------F----------1----1D61------------------------------------754--------1------------11------9--54---3---4--------------------------1------21-2------------2-5---E1-1-----15-11--1H-2-------1-------------A35-1--2--------------------------------2------------1-----775-----------4-4-----------------------------------------------3--------3--3----1---2-------------------------4------3---------2---------1--------------------1-a---111----1--1---------------------------------------------1-------LJN5LNZL264-------------------------------------------------1------11--s-2------------------------------------------------------------------------------------6----------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 161-169| PSIPRED cccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHcccccccccHHHccccccccc //