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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC67866.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  13/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.163.1e.76.1
:804 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   254->413 2b39A PDBj 8e-06 14.4 %
:RPS:PDB   600->781 1a0pA PDBj 5e-06 17.0 %
:RPS:SCOP  230->413 2cmzA1  e.76.1.2 * 1e-04 7.9 %
:RPS:SCOP  627->781 1a0pA2  d.163.1.1 * 1e-04 16.1 %
:HMM:SCOP  622->801 4crxA2 d.163.1.1 * 4.2e-08 22.2 %
:BLT:SWISS 165->237 DNLJ_PROMM 5e-04 32.9 %
:BLT:SWISS 318->411 ZNFX1_HUMAN 5e-05 36.1 %
:BLT:SWISS 567->691 LPQB_BIFLO 1e-05 32.8 %
:REPEAT 4|86->146|230->289|296->353|356->411
:REPEAT 2|15->85|158->229
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC67866.1 GT:GENE BAC67866.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION complement(177538..179952) GB:FROM 177538 GB:TO 179952 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:NOTE PF06827: Zinc finger found in FPG and IleRS GB:PROTEIN_ID BAC67866.1 LENGTH 804 SQ:AASEQ MTQPDRILSDPCGTIVDMVARVEPDLTVEQIRDAVKQAAPSRTARRSLAKTLTADPALLTSRRPEGSRSVERLIHKLLAHGARQVAVPLCAGCGKPEPLPQRRGKLRVCAYCDATARAQQQPCADCGLPRVIRYTGRNGEGLCSSCQPKDNIDWAQRICDHIATVDPTVPAETVRQIITTITRGRPHYVRRLAWDLEDRPGMLTGNAGHGTPKVIALIDALRDAGAQAIVRPPCPHCGRTSVTLRNTLGDVRVCPTCYNTRKAVNCSRCKRRSPVARRSPDGQSICNHCDRTDPINHEECSGCGRLRPIIRRNSPTGPLCDTCYRPPVAICLLCGHARPCFGVAGGMPRCENCTRLREPCLDCGRTMPVKARTANGPLCETCFKKNPVSFKACTRCGTVERLRHHGLCHRCACNEELTALLAGPDGAVAAPLMQLHSTLMASNHVRVLDWLQKRNTAVSVLREIATAECSLDHESLDARTDKAVEHLRAILVAAGALPRRDEQLVAAERWIAAAVAAIADLSDRHTIQAFATWTHLTRLRKYSRRKPITAGQAVSARRSVKAAVGFLAWLRAEGLNLEAVGQRDLDRWLEGGPTTRQYARDLVLWAVRTKRATNISIPARLKNSPTQALDEDERREIAHRLLGDDQLDARDRVAGLLSLLYAQPFSVIIRLTADHVVVREKSVLLRLGKEPLELSPELGNLIQQIAADRRRDGQIGQIDAHWLFPGIRPGQHLSHITLAARLKRLGIRSLPSRTAAIRDLTAEVPAAVVNRLLGLSTSTATSWAKRTAKTSYAAEIARRSDSDK GT:EXON 1|1-804:0| BL:SWS:NREP 3 BL:SWS:REP 165->237|DNLJ_PROMM|5e-04|32.9|73/696| BL:SWS:REP 318->411|ZNFX1_HUMAN|5e-05|36.1|83/1918| BL:SWS:REP 567->691|LPQB_BIFLO|1e-05|32.8|122/576| NREPEAT 2 REPEAT 4|86->146|230->289|296->353|356->411| REPEAT 2|15->85|158->229| SEG 505->519|vaaerwiaaavaaia| SEG 553->564|avsarrsvkaav| RP:PDB:NREP 2 RP:PDB:REP 254->413|2b39A|8e-06|14.4|160/1610| RP:PDB:REP 600->781|1a0pA|5e-06|17.0|176/271| RP:SCP:NREP 2 RP:SCP:REP 230->413|2cmzA1|1e-04|7.9|178/409|e.76.1.2| RP:SCP:REP 627->781|1a0pA2|1e-04|16.1|155/180|d.163.1.1| HM:SCP:REP 622->801|4crxA2|4.2e-08|22.2|180/212|d.163.1.1|1/1|DNA breaking-rejoining enzymes| OP:NHOMO 16 OP:NHOMOORG 13 OP:PATTERN -------------------------------------------------------------------- ----------------2----------------111--1----1---1------2------2----11--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 401 STR:RPRED 49.9 SQ:SECSTR #######################################################################################################################################################################################################################################HHTHHHHTTTcccEEcTTccccEEEEEccccccccEEEEEEccTTEEEcHHHHHHHHHcccccccEEEEEccccccEEEEEEccccccccEEEEEEEEEccEEEccccEEEEEETTcTTcEEEEEEccccTTcTTcccccHHHHHHTTTTTccccTTTTTTccTTEEEEEEEEEEEEccccEccc#####################################################################################################################################################HHHHHHHTTcccccccHHHHHHHHHHcHHHHHHHHHHHHHHHHTTccccHccTTcccccccccccHHHHHHHHHcccTTcHHHHHHHHHHHHHHHHcccHHHHTTccGGGEETTTTEEEEEcccccEEEEEccHHHHHHHHHHHHHTHHHHHTTccccccccTTcccccHHHHHHHHHHHHHHTTccHHHHHHHHHHccccGGGccccccccHHHH####################### DISOP:02AL 1-4, 93-103, 625-628, 795-797, 800-804| PSIPRED cccccHHHHcHHHHHHHHHHHHcccccHHHHHHHHHHccccHHHHHHHHHHHHccccEEEccccccHHHHHHHHHHHHHccHHEEcccHHHcccccccHHHHHHHHHHHHHHccccccccccccccccccEEEEcccccccccccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHccccHHHHHHHHHHHccccccEEcccccccHHHHHHHHHHHHccHHHHccccccccccccEEEccccccHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccEEccccccccEEEEccccccccccHHccHHHHcccccccccccccccccEEEcccccccccccccccccccccccccccccccccHHHHHHHcccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHccccccEEccccccccccccccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcccEEEEEEEEEEEEEEccEEEEEEccccccccHHHHHHHHHHHHHHHccccEEEccccccccccccccHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHcccHHHHHHHHHccccc //