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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC67896.1
DDBJ      :             putative integral membrane protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  12/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:294 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   139->244 3bjtA PDBj 5e-04 12.0 %
:HMM:PFM   162->286 PF00482 * GSPII_F 3.9e-06 21.8 119/124  
:PROS 49->62|PS00213|LIPOCALIN
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC67896.1 GT:GENE BAC67896.1 GT:PRODUCT putative integral membrane protein GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION 212678..213562 GB:FROM 212678 GB:TO 213562 GB:DIRECTION + GB:PRODUCT putative integral membrane protein GB:NOTE PF00482: Bacterial type II secretion system protein F domain GB:PROTEIN_ID BAC67896.1 LENGTH 294 SQ:AASEQ MNLFPVVLTGGAVGAGLALLVRELLRPQAALGPALQRSAPATLTMPEPELDREEVWGRWLLARLERLPGVRIPTINLALLGQGRGQFMLRKTTLAALGLLCPVIATIPWIIAGVSLPFYVPAGVGLLIAGLLFITPDLAVRDQAKRAREEFAHALSAYLDLVALKRAADAGPAEALEKAAEVGLGWPFLFLQGALRRARMEKIPPYQALTELAAEYDLPVLDDVADIMRGSATDGAAVYKALRARTAALNSELLADQAAEANAASEKMTAPGALLAVLVMLLMAFPAVIRMLTV GT:EXON 1|1-294:0| PROS 49->62|PS00213|LIPOCALIN|PDOC00187| TM:NTM 4 TM:REGION 4->26| TM:REGION 92->114| TM:REGION 120->142| TM:REGION 270->292| SEG 6->21|vvltggavgaglallv| SEG 255->264|adqaaeanaa| SEG 273->284|allavlvmllma| RP:PDB:NREP 1 RP:PDB:REP 139->244|3bjtA|5e-04|12.0|100/512| HM:PFM:NREP 1 HM:PFM:REP 162->286|PF00482|3.9e-06|21.8|119/124|GSPII_F| OP:NHOMO 16 OP:NHOMOORG 12 OP:PATTERN -------------------------------------------------------------------- ----2--------------------------------111--11------1---------113----12------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 100 STR:RPRED 34.0 SQ:SECSTR ##########################################################################################################################################HHHHHHHHHHHHHHTTcccTTTccccEEEEEcccccEEcccccccccccEEEcTTcEEEEEccccccEEEcccTTHHHHccT######TcEEEETTTTEEEEEEEE################################################## DISOP:02AL 249-267| PSIPRED cccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHccccccHHccHHccccHHHHHHHHHHHHcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc //