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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC67940.1
DDBJ      :             putative MerR-family transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  403/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
a.6.1
:282 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   29->95 1r8dB PDBj 3e-10 44.8 %
:BLT:PDB   71->147 1q0aB PDBj 4e-07 38.4 %
:RPS:PDB   28->134 3d70A PDBj 4e-23 22.2 %
:RPS:SCOP  29->129 1jbgA  a.6.1.3 * 9e-21 33.0 %
:HMM:SCOP  28->139 1jbgA_ a.6.1.3 * 2.9e-26 42.3 %
:RPS:PFM   31->66 PF00376 * MerR 2e-05 52.8 %
:RPS:PFM   71->128 PF09278 * MerR-DNA-bind 2e-08 55.6 %
:HMM:PFM   30->66 PF00376 * MerR 1.5e-18 51.4 37/38  
:HMM:PFM   71->136 PF09278 * MerR-DNA-bind 8.6e-16 45.3 64/65  
:BLT:SWISS 29->156 ZNTR_ECOLI 3e-15 39.5 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC67940.1 GT:GENE BAC67940.1 GT:PRODUCT putative MerR-family transcriptional regulator GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION complement(272429..273277) GB:FROM 272429 GB:TO 273277 GB:DIRECTION - GB:PRODUCT putative MerR-family transcriptional regulator GB:NOTE PF00376: MerR family regulatory protein GB:PROTEIN_ID BAC67940.1 LENGTH 282 SQ:AASEQ MPGRAPARPGRHLTFKSGRRFTVGGVTTYRISQLAERSGVPATTLRFYEDAGLLPADRTPSGYRVYGEDAVERLAFISSAKLLGLALEEIRELLDVREEGVCASVRARMLPLAADRIAETDGRIAELRAFSAHLAGVHTELSGPAPSGACGPDCGCTTTSPVAAGPVPITLSPTRPSRIAEPWRDTPVACTLGGAELGVRTEQWKQLVSKAEEREEIPDGVRLSFPAGAELAGEVAALAAAEQGCCAFFDFTLHLTPAALQLEVRAPESAAGMLADLFGATV GT:EXON 1|1-282:0| BL:SWS:NREP 1 BL:SWS:REP 29->156|ZNTR_ECOLI|3e-15|39.5|124/141| SEG 227->247|agaelagevaalaaaeqgcca| BL:PDB:NREP 2 BL:PDB:REP 29->95|1r8dB|3e-10|44.8|67/107| BL:PDB:REP 71->147|1q0aB|4e-07|38.4|73/89| RP:PDB:NREP 1 RP:PDB:REP 28->134|3d70A|4e-23|22.2|99/276| RP:PFM:NREP 2 RP:PFM:REP 31->66|PF00376|2e-05|52.8|36/37|MerR| RP:PFM:REP 71->128|PF09278|2e-08|55.6|54/65|MerR-DNA-bind| HM:PFM:NREP 2 HM:PFM:REP 30->66|PF00376|1.5e-18|51.4|37/38|MerR| HM:PFM:REP 71->136|PF09278|8.6e-16|45.3|64/65|MerR-DNA-bind| GO:PFM:NREP 2 GO:PFM GO:0003700|"GO:transcription factor activity"|PF00376|IPR000551| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00376|IPR000551| RP:SCP:NREP 1 RP:SCP:REP 29->129|1jbgA|9e-21|33.0|100/106|a.6.1.3| HM:SCP:REP 28->139|1jbgA_|2.9e-26|42.3|104/106|a.6.1.3|1/1|Putative DNA-binding domain| OP:NHOMO 773 OP:NHOMOORG 404 OP:PATTERN -------------------------------------------------------------------- 12112--1--12-1-1111-11---211111-1---4415-3441212-21-224-1---234-3243231----------1-----------------------1------------------------------1-1-------311211111-1-----11-1-121-------------2-111---112-----111-1121-1--2212111-1--1--------22-------------------11----1-----------------1112--------------------------------------------11------------1-11----------------------------------2--5----------2141-2--22222222224-23112342323-222232532224142335124243212111111112---1121------------------------------12-6-222233455433111155212222125492225--773-4274315141424111--1--------2--12---------1--------1---1111-1-----------------------------13331162-32-12122213142172121422---2--3------13122121111111111-1111111111111111111223-1-2211111111111211112111---1--111111111111---1----------32221113-3-1--1--11112141--1-2222352213234444222----------1221-----1111153---------------------------------------------------1----------------14- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------4---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 124 STR:RPRED 44.0 SQ:SECSTR ###########################cEEHHHHHHHHTccHHHHHHHHHTTcccEEcTTTccEEEcGGGGGHHHHHHHHHHHTccHHHHHHHTTccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccTT################################################################################################################################### DISOP:02AL 1-15, 167-177| PSIPRED ccccccccccccHHHHHHHHccccccccccHHHHHHHHcccHHHHHHHHHHccccccccccccEEccHHHHHHHHHHHHHHHccccHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHcccccccccccccccccccHHHccccHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHccc //