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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC67972.1
DDBJ      :             putative ISL3 family ISFsp1-like transposase
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  54/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.1a.4.14
:544 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   303->385 3d6yA PDBj 2e-04 13.0 %
:RPS:SCOP  298->324 1vz0A1  a.4.14.1 * 2e-04 48.1 %
:HMM:SCOP  282->333 1hcrA_ a.4.1.2 * 7.6e-05 30.8 %
:RPS:PFM   163->241 PF01610 * Transposase_12 6e-15 45.6 %
:HMM:PFM   162->254 PF01610 * Transposase_12 1.8e-26 37.6 93/100  
:HMM:PFM   294->325 PF02796 * HTH_7 2.2e-06 37.5 32/45  
:HMM:PFM   358->429 PF11740 * KfrA_N 0.00057 17.6 68/120  
:BLT:SWISS 18->241 TNPA_BORPA 1e-06 26.9 %
:BLT:SWISS 297->391 TRA6_BACST 5e-10 33.3 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC67972.1 GT:GENE BAC67972.1 GT:PRODUCT putative ISL3 family ISFsp1-like transposase GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION complement(305311..306945) GB:FROM 305311 GB:TO 306945 GB:DIRECTION - GB:PRODUCT putative ISL3 family ISFsp1-like transposase GB:NOTE ISL3 family (307013..305283) Inverted repeat sequence (30/30 bp) Target sequence (AGAATTCA); same as SAV7545 and SAV75480 GB:PROTEIN_ID BAC67972.1 LENGTH 544 SQ:AASEQ MILAECGELLKTMFPHLEGVLVEEVSPEGGVLHIVARTVESVPVPCPDCATPSVRRHSGYQRRLADGAVGGRQVSIELTVRRLFCDDQRCARVTFAEQVDGLTVRYGRRTPQLRCLLSAIAVALAGRAGERLAARLPVPVSRTTLLALVMALPDPYAETPRVLGVDEFATRKGHKYGTVLVDCETHAPIDLLPDRESATFAAWLTDHPGVEIICRDRGGAFADGARTGAPDAVQVADLWHLWHNLAETVKSLVSKHSSCLREPALASESPPEVLHPPLSHAGRLAERARRHHAAVHDLLGQGLTIRAVARRLELSRNTVRRYARAVTWEELATGRWQNLPSTLDPYKSYLHQRWHEGHTSGAKLHAELRERGFTGSYSVVRDYLRRFRRTSGDRPPPARPPGVRKVTGWITRNPDRMNDDDQQKLKAILARCPELEAATGHVRSFAAMMAIRSASRLPEWIATARADEHHGLRGFADGLLADLDAVILGLSTEWSSGCVEGRVTDIKLLKRQMAGRAGLPLLRKRVLLVAADRRQHRVTNQTAH GT:EXON 1|1-544:0| BL:SWS:NREP 2 BL:SWS:REP 18->241|TNPA_BORPA|1e-06|26.9|219/406| BL:SWS:REP 297->391|TRA6_BACST|5e-10|33.3|93/400| SEG 121->136|avalagragerlaarl| SEG 280->296|hagrlaerarrhhaavh| RP:PDB:NREP 1 RP:PDB:REP 303->385|3d6yA|2e-04|13.0|69/277| RP:PFM:NREP 1 RP:PFM:REP 163->241|PF01610|6e-15|45.6|79/100|Transposase_12| HM:PFM:NREP 3 HM:PFM:REP 162->254|PF01610|1.8e-26|37.6|93/100|Transposase_12| HM:PFM:REP 294->325|PF02796|2.2e-06|37.5|32/45|HTH_7| HM:PFM:REP 358->429|PF11740|0.00057|17.6|68/120|KfrA_N| GO:PFM:NREP 3 GO:PFM GO:0003677|"GO:DNA binding"|PF01610|IPR002560| GO:PFM GO:0004803|"GO:transposase activity"|PF01610|IPR002560| GO:PFM GO:0006313|"GO:transposition, DNA-mediated"|PF01610|IPR002560| RP:SCP:NREP 1 RP:SCP:REP 298->324|1vz0A1|2e-04|48.1|27/93|a.4.14.1| HM:SCP:REP 282->333|1hcrA_|7.6e-05|30.8|52/52|a.4.1.2|1/1|Homeodomain-like| OP:NHOMO 127 OP:NHOMOORG 56 OP:PATTERN --------------------------------------------------L-2--------------- ---2-----------------------------------1-156----------------11-----67---------------------------------------------------------------------------1-6--2------------------2---------------1-----------------1-----------------------------------------------------------------------------------------------------------------------------------------11------1---------1-----2---11------1--------1---------2-1------------231--7---2---111----1-1--------2------------------2-------------------------------------------------------11---------1----1-------------------------------------------------------------------1----------------------------------------------------------------------------------5--21-------2-1--2---------2------------------------1--1--------------------------------------------------------------------------------------------------------------------------------------------------------------------11---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 69 STR:RPRED 12.7 SQ:SECSTR ##############################################################################################################################################################################################################################################################################################################EEHHHHHHHHTccHHHHHHHHH############TTcccccEEcTTTccEEEcGGGGGHHHHHHHHHHTTc##cHHHHHHHTT############################################################################################################################################################### DISOP:02AL 257-273, 325-343, 392-397, 537-544| PSIPRED ccHHHHHHHHHHHcccccccEEEEEEEcccEEEEEEEccccccccccccccccEEEcccEEEEEEEEccccEEEEEEEEEEEEEEcccccccEEEEcccccccccHHHccHHHHHHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHHHHccccccccEEEEEEcEEEEccccEEEEEEEccccEEEEEEccccHHHHHHHHHHccccEEEEEEccHHHHHHHHHHccccEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHccccccHHHHHHHHHHHccccccccccccccHHHHHHHHHHHccccccHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHcccccc //