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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC68012.1
DDBJ      :             putative IS110 family IS1547-like transposase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  51/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.217.1
:365 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  310->327 1x4oA1  a.217.1.1 * 9e-04 50.0 %
:RPS:PFM   239->311 PF02371 * Transposase_20 1e-06 39.7 %
:HMM:PFM   238->322 PF02371 * Transposase_20 1.3e-24 38.1 84/87  
:HMM:PFM   85->175 PF01548 * Transposase_9 6e-19 37.8 90/96  
:BLT:SWISS 18->355 YI11_STRCL 4e-19 28.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68012.1 GT:GENE BAC68012.1 GT:PRODUCT putative IS110 family IS1547-like transposase GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION 355009..356106 GB:FROM 355009 GB:TO 356106 GB:DIRECTION + GB:PRODUCT putative IS110 family IS1547-like transposase GB:NOTE IS116/IS110/IS902 family GB:PROTEIN_ID BAC68012.1 LENGTH 365 SQ:AASEQ MSAVDALSSDREEHCPVILLGVDPHKSTHTATAVELESNQQVGTMRIEASLTDYRRLLAWAKRWPQRKWAVENANGLGRHLAQWLIARGESVVDVPAAATSRVRELSRGGRRKNDQIDAAAAATVACLQGDGRDVEPEDHTTALALLDERRVNLAQARVRTVNQLHALLRDLLPGGAPTQLSADLAAKLLRSVRPAGDVETVRKDIAWDLVAEIRKLDKQLTDNAARMQSLVEASGSALMDTPGIGPVMAARLIGRTRQAHRFPTSAAFANYAGAAPVEIASADKARHRLSRSGDRQLNSVLHTIAVVQIRMPNSPGHAYYQRKLSEGKTAKEAKRCLKRRLADHVWRVMIADERKAKSLPAHGT GT:EXON 1|1-365:0| BL:SWS:NREP 1 BL:SWS:REP 18->355|YI11_STRCL|4e-19|28.2|333/399| SEG 119->123|aaaaa| RP:PFM:NREP 1 RP:PFM:REP 239->311|PF02371|1e-06|39.7|73/87|Transposase_20| HM:PFM:NREP 2 HM:PFM:REP 238->322|PF02371|1.3e-24|38.1|84/87|Transposase_20| HM:PFM:REP 85->175|PF01548|6e-19|37.8|90/96|Transposase_9| GO:PFM:NREP 3 GO:PFM GO:0003677|"GO:DNA binding"|PF02371|IPR003346| GO:PFM GO:0004803|"GO:transposase activity"|PF02371|IPR003346| GO:PFM GO:0006313|"GO:transposition, DNA-mediated"|PF02371|IPR003346| RP:SCP:NREP 1 RP:SCP:REP 310->327|1x4oA1|9e-04|50.0|18/65|a.217.1.1| OP:NHOMO 109 OP:NHOMOORG 51 OP:PATTERN -------------------------------------------------------------------- -------C---5---2522-13--2122221------12----3--11---42-1-----1-----551------3-----2--------------1-------------------------------------------------------------------------------------------------111-1---12-1-1-------111----------------------------------------------------------------------------------------------------------------------------------4-----------2-------------------------------------------------2--------------------------------------------------------------------------------------------------------------------1---1----------------------------------------------------------------------------------------------------------------------------------------------------------1--------16--------------------1-----------------------------------------------------------------------------------------1----------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-2, 6-7, 105-114, 282-295, 358-365| PSIPRED ccccEEcccccEEcccEEEEEEEEcccEEEEEEEEccccEEEEEEEEcccHHHHHHHHHHHHHcccEEEEEEccccHHHHHHHHHHHccccEEEEcHHHHHHHHHHHccccccccHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHccccHHcccHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHcccccccccccccc //