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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC68020.1
DDBJ      :             putative IS4 family ISFsp6-like transposase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  46/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.1.25c.55.3
:333 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   96->171 3ecpA PDBj 1e-05 17.3 %
:RPS:SCOP  96->195 1l2qA  c.1.25.1 * 5e-04 11.5 %
:HMM:SCOP  19->171 1musA_ c.55.3.4 * 1.7e-10 27.0 %
:HMM:PFM   19->157 PF01609 * Transposase_11 3.8e-10 22.3 112/207  
:BLT:SWISS 30->129 Y4ZB_RHISN 7e-04 31.9 %
:BLT:SWISS 103->189 INSG_ECOLI 2e-12 39.1 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68020.1 GT:GENE BAC68020.1 GT:PRODUCT putative IS4 family ISFsp6-like transposase GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION complement(368620..369621) GB:FROM 368620 GB:TO 369621 GB:DIRECTION - GB:PRODUCT putative IS4 family ISFsp6-like transposase GB:NOTE IS4 family, partial GB:PROTEIN_ID BAC68020.1 LENGTH 333 SQ:AASEQ MPCSALPATGRPPTLAGSCTTWAPACWLVLWDKGFDANAFLAAVHDTGARFLGRLRANRRTPVLSRLTDGSYLSVIGTVPVRVVEAQITVIYDDCSFTNSYRLVTTLTDARRYPAPALVALYHQRWEHESAYFALRHTITDGRVLRSGDPVGVEQEMWALLALYQALRTVMVEAAESRPGTDPDRCGFTIAIHTARDLVVQAADVIKPGALGTRTTASSATGSWPGSSRTGAPASAPEKSGHRSPGTPNAKTTAAPTKAAWSPTLTSPSSNPIPTCPPSRTTIDTHRPPTGADSASWTSFTQNPTASGTLATSPATSATSPSARCTDSSTDGP GT:EXON 1|1-333:0| BL:SWS:NREP 2 BL:SWS:REP 30->129|Y4ZB_RHISN|7e-04|31.9|94/100| BL:SWS:REP 103->189|INSG_ECOLI|2e-12|39.1|87/442| SEG 209->223|galgtrttassatgs| SEG 245->264|pgtpnakttaaptkaawspt| SEG 304->323|ptasgtlatspatsatspsa| RP:PDB:NREP 1 RP:PDB:REP 96->171|3ecpA|1e-05|17.3|75/458| HM:PFM:NREP 1 HM:PFM:REP 19->157|PF01609|3.8e-10|22.3|112/207|Transposase_11| RP:SCP:NREP 1 RP:SCP:REP 96->195|1l2qA|5e-04|11.5|96/457|c.1.25.1| HM:SCP:REP 19->171|1musA_|1.7e-10|27.0|152/0|c.55.3.4|1/1|Ribonuclease H-like| OP:NHOMO 281 OP:NHOMOORG 46 OP:PATTERN -------------------------------------------------------------------- -------A-------------3-------------------135----------------1---1--3-----------------------------------------------------------------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------5----2------------------------------------------------------------------------------------------------1-------5----6117--------4--------------------18---1--11--------1-5---F---3111114----11-------------------NMCHIOV--7--------------------------------------------------------------------------------------------E--51------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 75 STR:RPRED 22.5 SQ:SECSTR ###############################################################################################ccccEEEEEEccccccHHHHHHHHHHHHTTHHHHHHHHHHTTTTc#GGGcccccHHHHHHHHHHHHHHHHHHHHHH################################################################################################################################################################## DISOP:02AL 1-4, 177-186, 197-333| PSIPRED ccccccccccccHHHHHHHHHHcccccEEEEEcccccHHHHHHHHHHcccEEEEccccccEEEEEccccccEEEEEEccEEEEEEEEEEEEEEcccccEEEEEEEEcccHHHccHHHHHHHHHHHHHHHHHHHHHHHHHccccEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc //