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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC68024.1
DDBJ      :             putative IS3 ISAav4-like family transposase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  516/915 : Eukaryota  3/199 : Viruses  3/175   --->[See Alignment]
c.55.3
:305 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   124->264 1cxuA PDBj 1e-14 19.0 %
:RPS:SCOP  125->281 1b92A  c.55.3.2 * 1e-12 17.5 %
:HMM:SCOP  118->288 1c0mA2 c.55.3.2 * 3.3e-31 31.9 %
:RPS:PFM   125->236 PF00665 * rve 2e-07 30.0 %
:HMM:PFM   122->239 PF00665 * rve 7.5e-21 26.5 117/120  
:BLT:SWISS 22->281 TRA9_MYCTU 4e-52 41.6 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68024.1 GT:GENE BAC68024.1 GT:PRODUCT putative IS3 ISAav4-like family transposase GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION 373063..373980 GB:FROM 373063 GB:TO 373980 GB:DIRECTION + GB:PRODUCT putative IS3 ISAav4-like family transposase GB:NOTE IS3 family (372707..374011) Inverted repeat sequence (10/11 bp). Target sequence (CC) GB:PROTEIN_ID BAC68024.1 LENGTH 305 SQ:AASEQ MTALLDEHPHLGVECVLRELHLASSTYYRWRHAEREPCERRRRDAELTEQIKQIHTDSGGIYGSPRVHAVLKREGVHVGRKRVERLMREADIAGISPRRKGFTRRDPKATLAPDLVERDFTAPAPNRLWVTDLTMISTGEGPLWLSAIRDAFSRRVVAWETSARADADLVLTTLEYALASREVEPGQLVHHADHGCQYTSVKLTTRLVRAGVEASMGSVGDSYDNALAENLWMLIKTECIRGRTFTTRAEANLALFEYIDGFYNSRRIQKRLGYLSPVEFEEKHYADQATAERTNLKPRQPALAS GT:EXON 1|1-305:0| BL:SWS:NREP 1 BL:SWS:REP 22->281|TRA9_MYCTU|4e-52|41.6|257/278| RP:PDB:NREP 1 RP:PDB:REP 124->264|1cxuA|1e-14|19.0|137/143| RP:PFM:NREP 1 RP:PFM:REP 125->236|PF00665|2e-07|30.0|110/116|rve| HM:PFM:NREP 1 HM:PFM:REP 122->239|PF00665|7.5e-21|26.5|117/120|rve| GO:PFM:NREP 2 GO:PFM GO:0003677|"GO:DNA binding"|PF00665|IPR001584| GO:PFM GO:0015074|"GO:DNA integration"|PF00665|IPR001584| RP:SCP:NREP 1 RP:SCP:REP 125->281|1b92A|1e-12|17.5|137/144|c.55.3.2| HM:SCP:REP 118->288|1c0mA2|3.3e-31|31.9|160/0|c.55.3.2|1/1|Ribonuclease H-like| OP:NHOMO 4456 OP:NHOMOORG 522 OP:PATTERN -------------------------------------------------------------------- 2-HI-PBM544N-E2H122-2M--58H5IIF-EEGE17FJ--163--7---4-1--4*---27---B212-5---94-1-47-----1--F---B-1----3-61475--------------------6232-4-3------41--91----------------1-3----------------5--1----174----362668C676B-5992-841-39414-2--2-261211-6----11-1-2-1--3-5--E8-N-6-11317-851931OkO561CBi9-7313-5355344332313645377282--78A-----17-41121111-8-S-33---139I-2--242B421543--612---5-22BE----------C3312-3-1-122342223232-B42--22D121--4441--3--12-7-1-9-2-12B3-1EEEEEEEE257C1C---------------------1----------8-11-----Z411JA55****HI5558691--BF-22I-299A87D3613C--57131-115222-111-DO7B-5-13132-D-1-------35-B33----142-----------------------D-2--2-J377-83--31PGOB8C-A8B51nLA736----27--------1132226OQD62D76D-O975B581*DQ5BCB5CB3514--81-37---3--38D-4--F6*e*****--FB9A4C9A915---3------5-11433-F677-15-111-1-----51--5BAI7833D11-41-341-5A9E---------42--465645P1A25D3MAH7978F------9-----C4----------16981-----21------C--3-------8--------- -----------------------------------------------------------------------------------------------------------------------------------------------3--------------------------1-----------------2---------- ------------------------------------------------------------1-----------------------------------------------------------------------------------------1-----1------------------ STR:NPRED 182 STR:RPRED 59.7 SQ:SECSTR ###############################################################################################################cccTTTcccccccTTcEEEEEEEEcGGGTTccEEEEEEETTTccEEEEEEccccHHHHHHHHHHHHHHHHHHHccccEEEEEccHHHHcHHHHHHHHHHTcEEEEEcTTcHHHHHHHHHHHHHHHHHHHHHHHHTTccccccHHHHHHHHHHHHccccHHHHHHHHHHHcHHHHEcGGGGTT############ DISOP:02AL 5-7, 287-305| PSIPRED cHHHHHccccccHHHHHHHHcccHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHccEEcccHHHHHHHHHHHHHHccccccccEEEcccccccHHHHHHHccccccccEEEEEEEEEccccccEEEEEEEEEccccEEEEEEccccccHHHHHHHHHHHHHHHcccccEEEEccccccHHHHHHHHHHHHHcccEEEEccccccccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHcccccHHHHHccccHHHHHHHHHHHHHHHHccccccccccccc //