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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC68027.3
DDBJ      :             putative ISL3 family ISPpu12-like transposase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  7/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.6.1
:315 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   9->42 3d71A PDBj 6e-07 32.4 %
:RPS:SCOP  10->42 1jbgA  a.6.1.3 * 1e-06 21.2 %
:HMM:SCOP  10->112 1q06A_ a.6.1.3 * 4.6e-23 35.0 %
:HMM:PFM   11->48 PF00376 * MerR 2.6e-15 44.7 38/38  
:HMM:PFM   55->108 PF09278 * MerR-DNA-bind 6.2e-06 33.3 54/65  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68027.3 GT:GENE BAC68027.3 GT:PRODUCT putative ISL3 family ISPpu12-like transposase GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION complement(375668..376615) GB:FROM 375668 GB:TO 376615 GB:DIRECTION - GB:PRODUCT putative ISL3 family ISPpu12-like transposase GB:NOTE IS607 family (374641..376830) Inverted repeat sequence (16/17 bp) Target sequence (CTAG). GB:PROTEIN_ID BAC68027.3 LENGTH 315 SQ:AASEQ MGDMDVTTLYSIGELSRRTGLSVRTIRFYSDSGVVAPTTRSPAGYRLYDLDALLRLELLRTLRELGMDLATIQRVLDRELSVAEVAAAHADAMDVQIRTLQLRRSVLRVVASRGSSPEETKLMHRLTQLSGEERRRLIDDFMDGTFGTVDADPAAVAMVRAATPDLPDDPTGEQVTAWVELAELVGDEDFRARMRRTAVRQAAGRPLDIECDAGEELMEFTRQKVAEAMEAGIDPLNDRGAPVIDDLVHRFAEVLARTPDTEFRDWMAQQFEETHDPRVDRYWQLVWIVNGWHVVPNLIPVYPWLIQALRNSRDA GT:EXON 1|1-315:0| SEG 43->66|agyrlydldallrlellrtlrelg| SEG 82->95|vaevaaahadamdv| SEG 100->116|lqlrrsvlrvvasrgss| SEG 148->165|tvdadpaavamvraatpd| RP:PDB:NREP 1 RP:PDB:REP 9->42|3d71A|6e-07|32.4|34/277| HM:PFM:NREP 2 HM:PFM:REP 11->48|PF00376|2.6e-15|44.7|38/38|MerR| HM:PFM:REP 55->108|PF09278|6.2e-06|33.3|54/65|MerR-DNA-bind| RP:SCP:NREP 1 RP:SCP:REP 10->42|1jbgA|1e-06|21.2|33/106|a.6.1.3| HM:SCP:REP 10->112|1q06A_|4.6e-23|35.0|103/127|a.6.1.3|1/1|Putative DNA-binding domain| OP:NHOMO 12 OP:NHOMOORG 7 OP:PATTERN -------------------------------------------------------------------- ----1-------------------------------------------------------1---31132------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 34 STR:RPRED 10.8 SQ:SECSTR ########cEEHHHHHHHHTccHHHHHHHHHTTcccccEEcT################################################################################################################################################################################################################################################################################# DISOP:02AL 1-9,312-316| PSIPRED cccccccccccHHHHHHHHcccHHHHHHHHHHcccccccccccccEEccHHHHHHHHHHHHHHHccccHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHcHHHHHHHHccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHcccccccccccHHHHHHHHHHHcccc //