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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC68056.1
DDBJ      :             putative IS256 family IS1164-like transposase
Swiss-Prot:             

Homologs  Archaea  8/68 : Bacteria  221/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
:412 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   23->372 PF00872 * Transposase_mut 1e-67 43.2 %
:HMM:PFM   11->379 PF00872 * Transposase_mut 7e-139 50.3 368/381  
:BLT:SWISS 1->393 TRA1_MYCTU e-154 67.2 %
:PROS 233->257|PS01007|TRANSPOSASE_MUTATOR
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68056.1 GT:GENE BAC68056.1 GT:PRODUCT putative IS256 family IS1164-like transposase GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION complement(404592..405830) GB:FROM 404592 GB:TO 405830 GB:DIRECTION - GB:PRODUCT putative IS256 family IS1164-like transposase GB:NOTE IS256 family (405963..404538). Inverted repeat sequence (17/23 bp). Target sequence (NG); same as ISSav6A (with 1bp mismatch) GB:PROTEIN_ID BAC68056.1 LENGTH 412 SQ:AASEQ MTAPDSLPLHALVEDNLAAASPDLLRAMVKTFADALMSAEADALCNAEYGQVSDERVNHRNGYRPREWDTRAGTVELAVPKLRQGSYFPHWLLERRRRAEQALISVVATAYLLGVSTRRVEKLAESLGVTQLSKSQVSAMAKHLDERVAEFRNRPLDQGPYAFVRVDALTQKVREGGRIINVHALIAVGVNADGHREILGIDVATAEDGAGWLAFLRSLTARGLKGVQLVVSDAHTGLVAAIGAVLPGASWQRCRTHYARNLLSQVPKSAQPWVATLLRTVFEQPDTDAVQAQMRHVLDALEAKFPKAAAHLVAAQHDLLAFTAFPREIWRQIWSNNPQERLNKEIRRRTDVVGIFPDRTALIRLVGAVLAEQNDEWTEARRYMGRELLAKARLHPIESETDETELPTELTA GT:EXON 1|1-412:0| BL:SWS:NREP 1 BL:SWS:REP 1->393|TRA1_MYCTU|e-154|67.2|393/415| PROS 233->257|PS01007|TRANSPOSASE_MUTATOR|PDOC00770| SEG 95->98|rrrr| SEG 398->411|esetdetelptelt| RP:PFM:NREP 1 RP:PFM:REP 23->372|PF00872|1e-67|43.2|347/358|Transposase_mut| HM:PFM:NREP 1 HM:PFM:REP 11->379|PF00872|7e-139|50.3|368/381|Transposase_mut| GO:PFM:NREP 3 GO:PFM GO:0003677|"GO:DNA binding"|PF00872|IPR001207| GO:PFM GO:0004803|"GO:transposase activity"|PF00872|IPR001207| GO:PFM GO:0006313|"GO:transposition, DNA-mediated"|PF00872|IPR001207| OP:NHOMO 1571 OP:NHOMOORG 232 OP:PATTERN ---------1-2C91----------------------------------4-14--------------- ----31-H---L-9-*799-9A---399999*DG1K-1D2---5---F---1--1-L---111---651--111142---92-----C--4------------2----1--------------------1-------------14-9--7--------------1-4-------------------29---A----------1------59-------F25----------1--1----------1----5E-H-----1R-M--------1----1D61--2---------------------------------864----311-1----------3-331--1--P--94---4--1A1-4--14-T-----------------3--7---21-2------------558--1E2-1-----18-11--2L-2-------1-------------I46-1--6--------------11--M------1--5---2-------364381-----EE5------I-K334-4--7-2-1-53-------------1---------4-1------1----4--------3--C-1--1---9-------------------------41--4--7-------1-2-4-----1-m--------------------14c---112----1--1--------1------------------11--11---1-1--1---3----1-1LKN6MQZM285-------------2-------------------1------331----3-1------12--s-1---------------------------1--9AB-----------------------------------45------1-------6----------- -1---------------------------------------------------------------------------------------------------------------------------------------------1--------------------------------------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-4, 52-59, 406-412| PSIPRED cccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccEEEEcccEEEEEccHHcccccccccccccHHHccHHHHHHHHHHHHccccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHccccccccEEEEEEccEEEEcccccEEEEEEEEEEEEEcccccEEEEEEEEEccccHHHHHHHHHHHHHcccccccEEEEcccccHHHHHHHHccccEEHHHHHHHHHHHHHHcccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHcccccccccHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHcccccccccHHccccccc //