[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Streptomyces avermitilis MA-4680 (save0)
Gene : BAC68072.1
DDBJ      :             putative membrane protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  68/915 : Eukaryota  99/199 : Viruses  0/175   --->[See Alignment]
:444 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   20->51 2b4jA PDBj 1e-04 12.5 %
:RPS:PFM   93->260 PF00324 * AA_permease 3e-10 28.0 %
:HMM:PFM   94->259 PF00324 * AA_permease 8.3e-18 18.9 164/479  
:HMM:PFM   357->411 PF03186 * CobD_Cbib 0.00011 25.9 54/292  
:BLT:SWISS 1->51 TRA9_MYCTU 1e-08 41.2 %
:BLT:SWISS 92->261 YG64_SCHPO 5e-22 31.8 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68072.1 GT:GENE BAC68072.1 GT:PRODUCT putative membrane protein GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION complement(427297..428631) GB:FROM 427297 GB:TO 428631 GB:DIRECTION - GB:PRODUCT putative membrane protein GB:PROTEIN_ID BAC68072.1 LENGTH 444 SQ:AASEQ MAEALNGSFKAELIEHQGPWRDADQVERSVVQWVGWYNTERLHSALDCLPPRGIRDPALPISGSNERRLKPRKPAATKLGAAHNGLYVTALGLLLAQYTFCGYDASSHLSEETTQAQISAPRGIVRSIWVSWIAGFILLAGLTSAIQDYAGTQSSSTGVPPAQIFLDVLGADGAKALMLIVIVAQLFSGSAETAAASRMVFAFSRDGAIPFAATWRRVSPRTKTPAAAVWLSVGSALVLAAPSLYSPTAYAAVTAINVIGITPGPPWRTRPRGSCGTAPSMPSTPSATSTGTGPHSWPSTTPSSTAPPFGRSHLCGHQPEAGANPRIRSNPYTTSLDAAHGYFAEGTRLTAVATLGGAAYRRYAQQTRRSSPPRAAGGGVMWIFLVLGLLPIVLLLWTFAGQVNQQMDSQFAGEVIALSVHRVTLTTGMRTDYVLTTVGSSPCR GT:EXON 1|1-444:0| BL:SWS:NREP 2 BL:SWS:REP 1->51|TRA9_MYCTU|1e-08|41.2|51/278| BL:SWS:REP 92->261|YG64_SCHPO|5e-22|31.8|170/542| TM:NTM 6 TM:REGION 83->105| TM:REGION 126->148| TM:REGION 171->193| TM:REGION 226->242| TM:REGION 248->265| TM:REGION 378->400| SEG 262->273|tpgppwrtrprg| SEG 276->308|gtapsmpstpsatstgtgphswpsttpsstapp| SEG 358->369|aayrryaqqtrr| SEG 385->396|lvlgllpivlll| RP:PDB:NREP 1 RP:PDB:REP 20->51|2b4jA|1e-04|12.5|32/135| RP:PFM:NREP 1 RP:PFM:REP 93->260|PF00324|3e-10|28.0|164/429|AA_permease| HM:PFM:NREP 2 HM:PFM:REP 94->259|PF00324|8.3e-18|18.9|164/479|AA_permease| HM:PFM:REP 357->411|PF03186|0.00011|25.9|54/292|CobD_Cbib| GO:PFM:NREP 3 GO:PFM GO:0006810|"GO:transport"|PF00324|IPR004841| GO:PFM GO:0016020|"GO:membrane"|PF00324|IPR004841| GO:PFM GO:0055085|"GO:transmembrane transport"|PF00324|IPR004841| OP:NHOMO 1003 OP:NHOMOORG 167 OP:PATTERN -------------------------------------------------------------------- ---22------2--1------5--4-------4636--331-------------1-------1---362------------------------------------------------------------------------------------------------------------------------------------------------------------------2--------------------------------11-------------------------------------------------------------------------------------------------------------------------------------------------------2-1--1--111111111-------2---B---BBBBBBBB1----------------------------------------------21----1---------------1-----2--12-----------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11111111111---------------------------------------------11-1-11----------------------------------------------------------------------------------------------------------- --------------2IAD7FMNGQMQG778978CCD9C9BBBC354C98AEHFO5733133395324545124-5121224666B896-AG8A358744-4-4888----------------------------------------------------------------------22-----1A3546829------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 32 STR:RPRED 7.2 SQ:SECSTR ###################GGGcccHHHHHHHHHHHHHHccHHHHHHHHHH######################################################################################################################################################################################################################################################################################################################################################################################################### DISOP:02AL 282-283, 288-312, 361-376| PSIPRED cHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccEEEccccEEHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHEEEHHHHEEccccccEEEEEccccccc //