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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC68073.1
DDBJ      :             putative IS110 family ISLxx2-like transposase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  38/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:344 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   226->306 PF02371 * Transposase_20 1e-05 39.2 %
:HMM:PFM   225->300 PF02371 * Transposase_20 1.6e-17 40.5 74/87  
:HMM:PFM   67->153 PF01548 * Transposase_9 2e-09 27.9 86/96  
:BLT:SWISS 217->333 YIS1_STRCO 5e-10 32.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68073.1 GT:GENE BAC68073.1 GT:PRODUCT putative IS110 family ISLxx2-like transposase GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION complement(428654..429688) GB:FROM 428654 GB:TO 429688 GB:DIRECTION - GB:PRODUCT putative IS110 family ISLxx2-like transposase GB:NOTE IS116/IS110/IS902 family GB:PROTEIN_ID BAC68073.1 LENGTH 344 SQ:AASEQ MIGVDTHKHVHVAAVMDTIGGILATLTIPTDTGGFQQLADWAGSFGDVVAFGIEGTGSYGATLTSFLRRAGHKVGEAGRPDRRLRRMNGKSDTLDAENAARAVLAGFATATPKTADGEAEMIRQLKIAHDQAVEQRATAMVTIKAILVHASDALRRETVGKTQISLARQLAALRPRRLEGPEDALRHTLRTLARRWQYLDAEAKELTKMIGDLVQRVAPQLLEPFGIGVDTAAEILVVTGDNPERIKSEAALAKLAGIAPVPTGSGMTAGRHRINHGGHRQLNAAIYRTVIVRMRFHHPTIGYVARPTAEGKTKREIIRCLKRYVIREVYHLLRPAPRRASAAS GT:EXON 1|1-344:0| BL:SWS:NREP 1 BL:SWS:REP 217->333|YIS1_STRCO|5e-10|32.8|116/405| SEG 166->178|larqlaalrprrl| SEG 184->195|alrhtlrtlarr| SEG 334->343|rpaprrasaa| RP:PFM:NREP 1 RP:PFM:REP 226->306|PF02371|1e-05|39.2|79/87|Transposase_20| HM:PFM:NREP 2 HM:PFM:REP 225->300|PF02371|1.6e-17|40.5|74/87|Transposase_20| HM:PFM:REP 67->153|PF01548|2e-09|27.9|86/96|Transposase_9| GO:PFM:NREP 3 GO:PFM GO:0003677|"GO:DNA binding"|PF02371|IPR003346| GO:PFM GO:0004803|"GO:transposase activity"|PF02371|IPR003346| GO:PFM GO:0006313|"GO:transposition, DNA-mediated"|PF02371|IPR003346| OP:NHOMO 96 OP:NHOMOORG 38 OP:PATTERN -------------------------------------------------------------------- -------D---5---2222-13--2122221------52----3--11---42-1-----1-----251------9-----2----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2--------------------------------------------------------------------------------------------------------------------1--------------------------------------1-----------------------------------------------------------------------------------------------------------------------1--------16---1----------------1-1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 81-93, 264-277, 336-344| PSIPRED cEEEEEcccEEEEEEEcccccEEEEEEEcccHHHHHHHHHHHHHcccEEEEEEEcccHHHHHHHHHHHHccccEEEEcHHHHHHHcccccccHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHcccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHcccccccccHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHccccccccccc //