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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC68082.1
DDBJ      :             putative LysR-family transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  290/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
a.4.5c.94.1
:301 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   19->237 2esnC PDBj 3e-18 30.4 %
:RPS:PDB   16->126 1cy8A PDBj 5e-12 11.0 %
:RPS:SCOP  16->60 2esnA1  a.4.5.37 * 3e-08 37.8 %
:RPS:SCOP  88->296 1utbA  c.94.1.1 * 2e-18 22.1 %
:HMM:SCOP  1->86 2esnA1 a.4.5.37 * 3e-17 34.9 %
:HMM:SCOP  88->295 2esnA2 c.94.1.1 * 2.6e-37 34.3 %
:RPS:PFM   110->220 PF03466 * LysR_substrate 5e-08 36.0 %
:HMM:PFM   108->295 PF03466 * LysR_substrate 5.6e-28 29.4 187/209  
:HMM:PFM   5->63 PF00126 * HTH_1 2.6e-18 33.9 59/60  
:BLT:SWISS 20->290 NAHR_PSEPU 2e-26 29.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68082.1 GT:GENE BAC68082.1 GT:PRODUCT putative LysR-family transcriptional regulator GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION 441565..442470 GB:FROM 441565 GB:TO 442470 GB:DIRECTION + GB:PRODUCT putative LysR-family transcriptional regulator GB:NOTE PF03466: LysR substrate binding domain GB:PROTEIN_ID BAC68082.1 LENGTH 301 SQ:AASEQ MQLDLNLLAALDALLEEGSVAGAAARLHVTAPAMSRSLGRIRRTTGDQILVRTGRTMTPTPYAIAVREQVHELLHQVQGVLAPSRELDLATLERTFTLRWHDSLVALSGPALLAAVRGQAPGVRLRFVAESSIDTPELRRGEVDLEANANRPSAPDIRAENVGETRLVIIVRQGHPLTRVKTVTAQRYAAADHVTVSRRGNLSNALDDSLARLGLTRRVVATAPTEAAALEFARGSDLLISVPEATTRSAVADLGLVVLPLPLELPSAPIYLSWHQRYDTDHAHTWLRGLARTALAMGGAS GT:EXON 1|1-301:0| BL:SWS:NREP 1 BL:SWS:REP 20->290|NAHR_PSEPU|2e-26|29.6|270/300| SEG 3->15|ldlnllaaldall| SEG 250->269|avadlglvvlplplelpsap| BL:PDB:NREP 1 BL:PDB:REP 19->237|2esnC|3e-18|30.4|217/298| RP:PDB:NREP 1 RP:PDB:REP 16->126|1cy8A|5e-12|11.0|109/563| RP:PFM:NREP 1 RP:PFM:REP 110->220|PF03466|5e-08|36.0|111/207|LysR_substrate| HM:PFM:NREP 2 HM:PFM:REP 108->295|PF03466|5.6e-28|29.4|187/209|LysR_substrate| HM:PFM:REP 5->63|PF00126|2.6e-18|33.9|59/60|HTH_1| RP:SCP:NREP 2 RP:SCP:REP 16->60|2esnA1|3e-08|37.8|45/89|a.4.5.37| RP:SCP:REP 88->296|1utbA|2e-18|22.1|208/214|c.94.1.1| HM:SCP:REP 1->86|2esnA1|3e-17|34.9|86/0|a.4.5.37|1/1|"Winged helix" DNA-binding domain| HM:SCP:REP 88->295|2esnA2|2.6e-37|34.3|207/0|c.94.1.1|1/1|Periplasmic binding protein-like II| OP:NHOMO 1133 OP:NHOMOORG 293 OP:PATTERN -------------------------------------------------------------------- ----3---------1----------2----------213--1-11----1--122-------1-1-323-----------------------------------------------------------------------------3--------------------11---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2--------32832--11112-----------1-11211212131-344246845459212121--1-111242222222212311--1-------------------------------34-136425IFIKGID6666FFAA77772AOD969D8--889522217772B3131----31----------151-------1--1-----------------19-----------------------------77244-4273223343277222242862A9-------------1522223-11-----11-11-11--1111-1------65723---11111111111111116-------1-21111111111111-2-----1222-261A111--1---------22222131123-A9B97BAA7B9A83334----------58964444466CBB311-2-----------2-------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------1--------------2---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 281 STR:RPRED 93.4 SQ:SECSTR ###############cHHHHHHHHHHTTcccTTTHHHHHHHHHTTTTccEEEETTEEEEcHHHHHHHHHHHHHcHHHHcHHHHHHHHHHHHHHHTTcccHHHHHHHHHHHHHHHHHHccGGGTcccccccTTTTTccccccHHHHHcHHHHHHTTTccccccGGGGGGHHHHHHTTccTTcEEEEccccEEEETTEEEEccEEEEccTTTGGGEEEcccEEEEEEcGGGcHHHHHTccEEEEEGGGccHTTTcTTcEEEEccTTcccEEEEEEEETTccccHHHHHHHHHHcTTcc##### DISOP:02AL 299-301| PSIPRED ccccHHHHHHHHHHHHcccHHHHHHHHccccHHHHHHHHHHHHHHccEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEEcHHHHHHHHHHHHHHHHHHccccEEEEEEccHHHHHHHHHccEEEEEEcccccccccEEEEEEcccEEEEEcccccccccccccHHHHHccccEEEcccccHHHHHHHHHHHccccccEEEEEccHHHHHHHHHHccHHHHHHHHHHHHHHHcccEEEEEcccccccEEEEEEEcccccccHHHHHHHHHHHHHHHccccc //