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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC68110.1
DDBJ      :             putative LuxR-family transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  31/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.6c.37.1
:944 amino acids
:PSIPRED
:DISOPRED
:BLT:PDB   879->931 2rnjA PDBj 2e-05 34.0 %
:RPS:PDB   29->84 3cmuA PDBj 6e-04 17.9 %
:RPS:PDB   873->941 3cloA PDBj 2e-13 24.6 %
:RPS:SCOP  200->240 2a5yB3  c.37.1.20 * 7e-05 29.3 %
:RPS:SCOP  881->941 1fseA  a.4.6.2 * 5e-13 31.1 %
:HMM:SCOP  27->264 1sxjB2 c.37.1.20 * 7.8e-10 24.0 %
:HMM:SCOP  861->943 1p4wA_ a.4.6.2 * 4.3e-17 34.9 %
:RPS:PFM   883->935 PF00196 * GerE 3e-10 49.1 %
:HMM:PFM   882->935 PF00196 * GerE 4.2e-17 38.9 54/58  
:HMM:PFM   203->261 PF00931 * NB-ARC 5.5e-05 24.6 57/285  
:HMM:PFM   701->724 PF07721 * TPR_4 5.9e-05 41.7 24/26  
:HMM:PFM   147->191 PF07652 * Flavi_DEAD 0.00055 24.4 45/148  
:HMM:PFM   50->77 PF00493 * MCM 0.00083 46.4 28/326  
:BLT:SWISS 31->83 RADA_TREPA 7e-04 39.6 %
:BLT:SWISS 883->942 Y914_MYCBO 7e-10 48.3 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68110.1 GT:GENE BAC68110.1 GT:PRODUCT putative LuxR-family transcriptional regulator GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION 476025..478859 GB:FROM 476025 GB:TO 478859 GB:DIRECTION + GB:PRODUCT putative LuxR-family transcriptional regulator GB:NOTE PF00196: Bacterial regulatory proteins, luxR family GB:PROTEIN_ID BAC68110.1 LENGTH 944 SQ:AASEQ MDETTVVTGGVPGAGTGPAGDTEFPPVGRECERALLDGLLDALTERGGALLLSGDPGTGKSMLLGYTAGRCRTTVLRARGVESEAVLPYTVLADLLLPLRPYFTELPPGQRRALEGCLALADVAGPNPYAVCAGALGVLAAAGEVRPLLVVVDDLHWVDPSSRQVLQFVARRLTTERVALVMAVQPGAEEDGPWASVPRVALGPLAEDDCWTLLRRHGLDRTDPAADRLVRLSLGNPLVLVEYAGMLARMRATGATQWDEMWEAPGPLVERAWRGQLRALPHRTREALVYVAACRTPDLALLTKALAADGTDLDALDAAERTGLVRIRDGVCELRHPVLRPVVLGQCTTARRLQVYRRLAALSSDELRTWYLAAAAPGPDEAVAGRLAADAEQARRRNALAAAACAWHRAAELSPDPADAARRLLEAARDAFCGGTARDAARWCEQALVHSRDPRLTADIGLLRGQACTWLGDPARAHRLLVDAARAVEPVDRPRACLLYGAAVAPAMMDGRLRHASDIAARCQELADDGRDTQRRHAAVMRAKAQALGGDVPTGRAALLALLDESHSPVAMDIARGPEERQIAMDIAQGLSWTDDGEAARPVLDAVIECTRRDSSPTLLSYALLGRCEVEMWSHWQQARADAAEALRWAEEFGLLAMSGYALIQLARLDGLRGDTAACEERIARYEHWCGGRLRGLDMFARGTLGAAALTAGDPDTCRTHLEAAFRMADGMGLVNPSLMPWVADLAEASLRTGARERAVAVADWLAERAEATALAWPAAAYARCRVMLARTAQEAADWLATAELAHSKREMPFERARTRLVAGEVLRRFRRPSAAQEPLLAAQRTFTALGAAPWAARARAEVAAAGHRTAVRQTEPSLTELLTPQEFQVARAIGEGLSNVEAAAALFLSRKTIEAHLTRVYRKLGIRSRSDLARCMAHAGAVG GT:EXON 1|1-944:0| BL:SWS:NREP 2 BL:SWS:REP 31->83|RADA_TREPA|7e-04|39.6|53/455| BL:SWS:REP 883->942|Y914_MYCBO|7e-10|48.3|60/882| SEG 2->23|dettvvtggvpgagtgpagdte| SEG 130->143|avcagalgvlaaag| SEG 148->159|llvvvddlhwvd| SEG 298->319|dlalltkalaadgtdldaldaa| SEG 373->385|aaaapgpdeavag| SEG 391->411|aeqarrrnalaaaacawhraa| SEG 418->431|adaarrlleaarda| SEG 636->651|wqqaradaaealrwae| SEG 703->713|gtlgaaaltag| SEG 765->784|wlaeraeatalawpaaayar| SEG 849->871|algaapwaararaevaaaghrta| BL:PDB:NREP 1 BL:PDB:REP 879->931|2rnjA|2e-05|34.0|53/67| RP:PDB:NREP 2 RP:PDB:REP 29->84|3cmuA|6e-04|17.9|56/1937| RP:PDB:REP 873->941|3cloA|2e-13|24.6|69/249| RP:PFM:NREP 1 RP:PFM:REP 883->935|PF00196|3e-10|49.1|53/57|GerE| HM:PFM:NREP 5 HM:PFM:REP 882->935|PF00196|4.2e-17|38.9|54/58|GerE| HM:PFM:REP 203->261|PF00931|5.5e-05|24.6|57/285|NB-ARC| HM:PFM:REP 701->724|PF07721|5.9e-05|41.7|24/26|TPR_4| HM:PFM:REP 147->191|PF07652|0.00055|24.4|45/148|Flavi_DEAD| HM:PFM:REP 50->77|PF00493|0.00083|46.4|28/326|MCM| GO:PFM:NREP 4 GO:PFM GO:0003700|"GO:transcription factor activity"|PF00196|IPR000792| GO:PFM GO:0005622|"GO:intracellular"|PF00196|IPR000792| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00196|IPR000792| GO:PFM GO:0043565|"GO:sequence-specific DNA binding"|PF00196|IPR000792| RP:SCP:NREP 2 RP:SCP:REP 200->240|2a5yB3|7e-05|29.3|41/275|c.37.1.20| RP:SCP:REP 881->941|1fseA|5e-13|31.1|61/67|a.4.6.2| HM:SCP:REP 27->264|1sxjB2|7.8e-10|24.0|192/224|c.37.1.20|1/1|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 861->943|1p4wA_|4.3e-17|34.9|83/0|a.4.6.2|1/1|C-terminal effector domain of the bipartite response regulators| OP:NHOMO 74 OP:NHOMOORG 31 OP:PATTERN -------------------------------------------------------------------- ----9--1222---1------4--25------53331-11---131-------1------1---2233711-----------1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 16-18, 868-874| PSIPRED cccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccccEEEEEccccccHHHHHHHHHHHcccEEEEEEEccccccccHHHHHHHHHHHHcccccccHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHcccccEEEEEEccccccHHHHHHHHHHHHHcccccEEEEEEEccccccccccccccEEEcccccHHHHHHHHHHHcccccHHHHHHHHHHHcccHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHcccccHHHHHHHHcccccHHHHHHHHHHcccEEEcccccEEHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHHHHHHccccHHHHHHHHHHccccc //