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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC68130.1
DDBJ      :             putative Tn3 family ISXc5-like transposase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  67/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
a.4.1
:344 amino acids
:PSIPRED
:DISOPRED
:HMM:SCOP  228->335 1pdnC_ a.4.1.5 * 4e-06 22.3 %
:RPS:PFM   25->204 PF01526 * Transposase_7 4e-27 40.4 %
:HMM:PFM   1->224 PF01526 * Transposase_7 1.1e-52 34.4 221/968  
:HMM:PFM   229->288 PF01527 * Transposase_8 0.00015 29.8 57/76  
:BLT:SWISS 1->202 TNP3_ECOLX 2e-36 44.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68130.1 GT:GENE BAC68130.1 GT:PRODUCT putative Tn3 family ISXc5-like transposase GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION 567663..568697 GB:FROM 567663 GB:TO 568697 GB:DIRECTION + GB:PRODUCT putative Tn3 family ISXc5-like transposase GB:NOTE PF01526: Transposase GB:PROTEIN_ID BAC68130.1 LENGTH 344 SQ:AASEQ MPVEFLSHDQVSRYGRFASAPTPGELEQFFRLDAKALESARSKRAPANRLGWAVQWGCVRMLGVFPTEDLSVVPEVVVRFAAEQLGVDPGEFAAYGARRQNRYEHAWEIRDAYAYRESPAAEAQVREFLATRVWASWEGPRALFDRAVGWLVDNRVLLPGITTLTRLVAEVRAQENAALYRTLDEAVPEKLRQSMRDLLKVPEGRRVSELERLRRSPMGVSGSADRLAFSERIRMEAVAMFTAGPGSTDIAKELRVSVQSVQRWRSGLAGDRPGRGAVPQPVSVELSETLFAALDEERAKGFAPSWTIRYLHHDFPIFGQRYAYKWSQGCLHSFGRSAQGYRDQ GT:EXON 1|1-344:0| BL:SWS:NREP 1 BL:SWS:REP 1->202|TNP3_ECOLX|2e-36|44.0|200/1015| SEG 205->216|rrvselerlrrs| RP:PFM:NREP 1 RP:PFM:REP 25->204|PF01526|4e-27|40.4|178/950|Transposase_7| HM:PFM:NREP 2 HM:PFM:REP 1->224|PF01526|1.1e-52|34.4|221/968|Transposase_7| HM:PFM:REP 229->288|PF01527|0.00015|29.8|57/76|Transposase_8| GO:PFM:NREP 3 GO:PFM GO:0003677|"GO:DNA binding"|PF01526|IPR002513| GO:PFM GO:0004803|"GO:transposase activity"|PF01526|IPR002513| GO:PFM GO:0006313|"GO:transposition, DNA-mediated"|PF01526|IPR002513| HM:SCP:REP 228->335|1pdnC_|4e-06|22.3|103/0|a.4.1.5|1/1|Homeodomain-like| OP:NHOMO 95 OP:NHOMOORG 68 OP:PATTERN -------------------------------------------------------------------- ------------------------------------111--111--------1-3-----1----122-------------------------------------------------------------------------------1-1-------------------1--------------1----------------1--1---2------------------------1-------------------------------1------------------------------------------------------------1--------------------------------1--------------------------------------------------------2----------------------1---1-----------------------------------------------------2-----------------------------1----4-------2--1-------3-------------12--------1------------------4------------------------------------2--3------------1--------------------------1------------1-----1-1-------1-----11-1------1---2-----1---2-----------1-111-11-1--------------------------1-------2---1---------2---------111----------------------------2-3-------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 341-344| PSIPRED cccccccHHHHHHHccccccccHHHHHHHccccHHHHHHHHHccccccHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHcccHHHHcccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccEEcccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHcccccccccHHHHHHHHcccccHHHHHHHHHHHHccHHHHHHcccccHHHHHHHHHHHHHccHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc //