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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC68131.1
DDBJ      :             putative lipoprotein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  58/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
b.160.1
:417 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   254->355 1zatA PDBj 7e-04 31.2 %
:RPS:PDB   74->158 2a9dA PDBj 2e-04 16.5 %
:RPS:PDB   165->334 2dhhA PDBj 2e-04 15.1 %
:RPS:SCOP  246->385 1zatA1  b.160.1.1 * 4e-20 25.4 %
:HMM:SCOP  246->386 1zatA1 b.160.1.1 * 1.1e-23 30.2 %
:RPS:PFM   141->180 PF09008 * Head_binding 9e-04 37.5 %
:HMM:PFM   251->385 PF03734 * YkuD 1.1e-16 28.7 108/116  
:BLT:SWISS 66->414 Y493_MYCBO 1e-32 30.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68131.1 GT:GENE BAC68131.1 GT:PRODUCT putative lipoprotein GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION 568699..569952 GB:FROM 568699 GB:TO 569952 GB:DIRECTION + GB:PRODUCT putative lipoprotein GB:NOTE PF03734: ErfK/YbiS/YcfS/YnhG GB:PROTEIN_ID BAC68131.1 LENGTH 417 SQ:AASEQ MGEALITLCTRSTRLAATAGVLGGVLAVTALGGTSNAATSGNGAGNHPTSQARINQAGAQEASDARIEITPGQGTYSVGTNHPVSVTVTSGKLTKVTMTAVATGAEIPGTLSTDGTSWKPNGRLERATKYQIAAEAGDVKGRSTTGSATITTVSPANDFIGHLSPEDGSTVGVAMPVTVNFDKAISDKAAVQSEIRVSSSSGQRVVGHWFNDHRVDFRPENYWRPGSTVTVTLNRHGIQKTVTFKIGRSQISTVDAKTKQMTVVRDGKTIKTIPISSGSPEHPTYNGQMVISEKFRQIHMNGASVGLTEKNGKPSYDIKAVPHAMRLTDSGTFIHGNYWGTDSVFGEANTSHGCVGLKDVRGDSHGRQPAAWFFDHSIVGDVVIVKNSEEKTMLAPDNGLSDWNMSWSEWVAGSPAT GT:EXON 1|1-417:0| BL:SWS:NREP 1 BL:SWS:REP 66->414|Y493_MYCBO|1e-32|30.7|329/451| SEG 15->34|laatagvlggvlavtalggt| SEG 198->201|ssss| BL:PDB:NREP 1 BL:PDB:REP 254->355|1zatA|7e-04|31.2|93/248| RP:PDB:NREP 2 RP:PDB:REP 74->158|2a9dA|2e-04|16.5|85/369| RP:PDB:REP 165->334|2dhhA|2e-04|15.1|159/1022| RP:PFM:NREP 1 RP:PFM:REP 141->180|PF09008|9e-04|37.5|40/112|Head_binding| HM:PFM:NREP 1 HM:PFM:REP 251->385|PF03734|1.1e-16|28.7|108/116|YkuD| GO:PFM:NREP 1 GO:PFM GO:0009405|"GO:pathogenesis"|PF09008|IPR009093| RP:SCP:NREP 1 RP:SCP:REP 246->385|1zatA1|4e-20|25.4|122/126|b.160.1.1| HM:SCP:REP 246->386|1zatA1|1.1e-23|30.2|126/0|b.160.1.1|1/1|L,D-transpeptidase catalytic domain-like| OP:NHOMO 211 OP:NHOMOORG 58 OP:PATTERN -------------------------------------------------------------------- ----511111111156655-5E44565555549699448711111-------1121-1--32112239551-----------------------------------------------------------------------------------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 272 STR:RPRED 65.2 SQ:SECSTR #########################################################################EEEEccTTccEEEEEEEcccccccEEcEEccccccTTcccccEEEEEEEEEcTTcEEEEEEEEEETTccccccccGGGcTTcccc######ccccccccEEEEEEccccccTTHHHHHHHHHHHHHHccGGGccc#cEEcccccEEcccccccHH###HHHHTTHHHHHHHHHHcccccEEEccccEEEccETTEEccccGGGcccTTTEcTTccEEEGGGcccccccEEccEEEEETTEEEEEEEEcccccccccHHHHHEEcTTcccTTHHHHHcccccE############################################################## DISOP:02AL 1-2, 5-7, 48-58, 416-417| PSIPRED ccEEEEEccccccHHHHHHHHHHHHHHHHHHcccccccEEccccccccccEEEccccccccccccEEEEEEccccccccccccEEEEEcccEEEEEEEEEcccccEEccEEcccccEEEEccccccccEEEEEEEEEccccccccccEEEEEccccccEEEEEEEccccEEEccEEEEEEEccccccHHHcccEEEEEcccccEEEEEEccccEEEEEEccccccccEEEEEcccccccccccEEEcccEEEEEEccccEEEEEEccEEEEEEEEEccccccccccEEEEEEEccccEEEcccEEEccccccccccccccccEEEEEEcccEEEEcccccccccccccccccEEEEcccHHccccccHHHHHHHHHcccccEEEEEEcccccccccccccccccccHHHHccccccc //