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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC68133.1
DDBJ      :             putative IS30 family ISCmi3-like transposase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  204/915 : Eukaryota  1/199 : Viruses  1/175   --->[See Alignment]
c.55.3
:212 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   35->205 1biuA PDBj 3e-10 12.5 %
:HMM:SCOP  31->209 1c6vA_ c.55.3.2 * 8.8e-20 23.6 %
:HMM:PFM   34->158 PF00665 * rve 7.6e-12 20.4 108/120  
:BLT:SWISS 35->197 INSI_ECOLI 3e-44 56.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68133.1 GT:GENE BAC68133.1 GT:PRODUCT putative IS30 family ISCmi3-like transposase GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION 570940..571578 GB:FROM 570940 GB:TO 571578 GB:DIRECTION + GB:PRODUCT putative IS30 family ISCmi3-like transposase GB:NOTE IS30 family, partial GB:PROTEIN_ID BAC68133.1 LENGTH 212 SQ:AASEQ MKYTTTAPTADCAVRPSRSRRSERPAEAADRAVPGHWEGDLIIGTGRSAIGTLVERSSRSTLLVHLPRLEGWGENPPVKNGTSLGGYGAIAMNTALTASMTQLPEQLRKTLTWDRGKELSGHAQFALDTGTKVFFADPHSPWQRPTNENTNGLLRQYFPKGTDLSRWSSTDLEAVAMAINNRPRKTLGWRTPAEVFEEQLRSLQQPGVATTN GT:EXON 1|1-212:0| BL:SWS:NREP 1 BL:SWS:REP 35->197|INSI_ECOLI|3e-44|56.6|145/383| SEG 15->32|rpsrsrrserpaeaadra| RP:PDB:NREP 1 RP:PDB:REP 35->205|1biuA|3e-10|12.5|144/147| HM:PFM:NREP 1 HM:PFM:REP 34->158|PF00665|7.6e-12|20.4|108/120|rve| HM:SCP:REP 31->209|1c6vA_|8.8e-20|23.6|157/0|c.55.3.2|1/1|Ribonuclease H-like| OP:NHOMO 1015 OP:NHOMOORG 206 OP:PATTERN -------------------------------------------------------------------- ------1-3516-4--211-12---211111-2636-278-123---4--8F-1-12----14---E2-------A7-----1------2--------------------------------------------------------------8-------------1----------------1------------------1-------3-----------1B---------5---6-2-21---22----3--N4sL2I-861164613-1243----1-L------------------B21C-1112131-11A8-----------------2---------E--S-----------------382----1-1111-----------------------------1--1E----------111--13-133---------2--1-------------------------------------1------------2-------3-1-6----------1--1--1i2--1D-12-14--212-13--24---------E5A7---2--2----------------------------2-------------------------------5--------6-R1228--2---------------1--------------31113---1--143--1---311111311----1-16-------------------------------------------55--4---1-----6----------1-1---8---------------2-----13---k---------A--1------1-61------1edg--------22------------3------------3-------6-2----------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------- ------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------ STR:NPRED 172 STR:RPRED 81.1 SQ:SECSTR #################################cGEEEEEEEEEETTEEEEEEEETTTTcEEEEEEccccHEEEEEEEccccHHHHHHHHHHHHHHHHHHHHHccccEEEEcccHHHHcHHHHHHHHHHTcEEEEccHHHHHHHHHHHHHHHHHGGGccHHGGGcccHHHHHHHHHHHHHHccGGGcccccHHHHHHHHHHHHcc####### DISOP:02AL 1-20, 204-205, 207-212| PSIPRED ccccccccccccccccccccHHHccHHHHHccccccEEEEEEEEcccEEEEEEEEEcccEEEEEEEcccccHHHHHHHHHHHccccccHHHHHHHHHHHHHHccccEEEEEEEcccHHHHHHHHHHHHHccEEEEEccccccccccEEHHHHHHHHHHHccccHHHccHHHHHHHHHHHHcccHHHHccccHHHHHHHHHHHHHcccccccc //