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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC68211.1
DDBJ      :             putative nuclease
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  1/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
b.40.1
:285 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   11->66 3ejiA PDBj 3e-05 23.1 %
:RPS:PDB   17->207 3d8gA PDBj 2e-04 22.7 %
:RPS:SCOP  15->67 1a2tA  b.40.1.1 * 6e-06 22.6 %
:HMM:PFM   33->207 PF00565 * SNase 8.6e-06 25.2 107/108  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68211.1 GT:GENE BAC68211.1 GT:PRODUCT putative nuclease GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION complement(644154..645011) GB:FROM 644154 GB:TO 645011 GB:DIRECTION - GB:PRODUCT putative nuclease GB:NOTE PF00565: Staphylococcal nuclease homologue GB:PROTEIN_ID BAC68211.1 LENGTH 285 SQ:AASEQ MVDLGFVGPSRPANDYRFLSVTDGDTPNIAMAIRMVSIDTPESHYGGAPATAQAALERAKTRLLDGTYDALPQDLRDYLVSRITPDAAQRHQSAGQAAAEAHTAMVASRLAHPDGSQRKMAVIATGELVEGNGRLLAYTAPWFTGSASDPLPPRDDPRRRTFNLDMVALGWAATFVIYPSIPPTKDLNLLLEEAEAAWTQQLGAWAQFGQDLLLGYEYRACIKLGTKELTDPAAAIAQAYQRVCVDLRTLTEVGLYGYHQVPPQHRLWIWATDLEQARKDLPISS GT:EXON 1|1-285:0| SEG 149->160|dplpprddprrr| SEG 189->197|llleeaeaa| RP:PDB:NREP 2 RP:PDB:REP 11->66|3ejiA|3e-05|23.1|52/130| RP:PDB:REP 17->207|3d8gA|2e-04|22.7|119/130| HM:PFM:NREP 1 HM:PFM:REP 33->207|PF00565|8.6e-06|25.2|107/108|SNase| RP:SCP:NREP 1 RP:SCP:REP 15->67|1a2tA|6e-06|22.6|53/135|b.40.1.1| OP:NHOMO 1 OP:NHOMOORG 1 OP:PATTERN -------------------------------------------------------------------- -------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 179 STR:RPRED 62.8 SQ:SECSTR ##########cccEEEEEEEEccccETTEEEEEEETTEEcccTTTHHTcTTHHHHHHHHHHHHHccccccccccTTccEEEEEEETcccTTcTTHHHHHHHHHHHHHTc#####ccccEEEEEcccccccTTccEEEEEEEEETTE###########TTEEHHHHHHHTTccEEccccG##GGcTTHHHHHHHHHHHHHTTcGGGGc############################################################################## DISOP:02AL 88-98, 283-285| PSIPRED cEEccccccccccccEEEEEEcccccccEEEEEEEEEEcccccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEcEEEEcccEEEEEEccccccccccccccccccccEEEccEEEEEEEEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHcHHHHHcHHHHHHHHHccHHHccHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEEccHHHHHHcccccc //