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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC68218.1
DDBJ      :             putative TetR-family transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  82/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.121.1a.4.1
:194 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   20->191 2q24B PDBj 4e-28 44.4 %
:RPS:PDB   15->181 3bjbE PDBj 2e-14 25.2 %
:RPS:SCOP  14->77 2o7tA1  a.4.1.9 * 7e-18 37.5 %
:RPS:SCOP  92->193 2fq4A2  a.121.1.1 * 9e-06 13.7 %
:HMM:SCOP  8->90 1t33A1 a.4.1.9 * 2.4e-18 38.6 %
:HMM:SCOP  88->193 2fq4A2 a.121.1.1 * 6.2e-05 21.9 %
:RPS:PFM   24->68 PF00440 * TetR_N 1e-07 60.0 %
:HMM:PFM   24->69 PF00440 * TetR_N 6.8e-17 54.3 46/47  
:HMM:PFM   146->174 PF06411 * HdeA 0.001 35.7 28/79  
:BLT:SWISS 14->75 Y2897_STAA8 7e-09 43.5 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68218.1 GT:GENE BAC68218.1 GT:PRODUCT putative TetR-family transcriptional regulator GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION 653742..654326 GB:FROM 653742 GB:TO 654326 GB:DIRECTION + GB:PRODUCT putative TetR-family transcriptional regulator GB:NOTE PF00440: Bacterial regulatory proteins, tetR family GB:PROTEIN_ID BAC68218.1 LENGTH 194 SQ:AASEQ MTVTRTETTQRRPRADGQRNRARILEAALRLFVERGPDAPFTEIAKQAGVGVGTVYRHFPAREDLIEAAYRSELDAVCAAAAELLEQAPPQDALRIWMDRFVDYWATKIGLTEAIGAVVAAGRDPFAQSRGRVDEAVGTLLAATSAAGVTRPEVEPDDVVVSLSGIAMVAPVLQDRDQVSRVLDLLYEGIRARP GT:EXON 1|1-194:0| BL:SWS:NREP 1 BL:SWS:REP 14->75|Y2897_STAA8|7e-09|43.5|62/185| SEG 79->91|aaaaelleqappq| BL:PDB:NREP 1 BL:PDB:REP 20->191|2q24B|4e-28|44.4|169/172| RP:PDB:NREP 1 RP:PDB:REP 15->181|3bjbE|2e-14|25.2|159/176| RP:PFM:NREP 1 RP:PFM:REP 24->68|PF00440|1e-07|60.0|45/47|TetR_N| HM:PFM:NREP 2 HM:PFM:REP 24->69|PF00440|6.8e-17|54.3|46/47|TetR_N| HM:PFM:REP 146->174|PF06411|0.001|35.7|28/79|HdeA| GO:PFM:NREP 2 GO:PFM GO:0003700|"GO:transcription factor activity"|PF00440|IPR001647| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00440|IPR001647| RP:SCP:NREP 2 RP:SCP:REP 14->77|2o7tA1|7e-18|37.5|64/78|a.4.1.9| RP:SCP:REP 92->193|2fq4A2|9e-06|13.7|102/115|a.121.1.1| HM:SCP:REP 8->90|1t33A1|2.4e-18|38.6|83/0|a.4.1.9|1/1|Homeodomain-like| HM:SCP:REP 88->193|2fq4A2|6.2e-05|21.9|105/0|a.121.1.1|1/1|Tetracyclin repressor-like, C-terminal domain| OP:NHOMO 177 OP:NHOMOORG 82 OP:PATTERN -------------------------------------------------------------------- 111-F-----111-32311-1111-611111-23331132-A1D51----------11--423-B-1475--------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--4--------11111------1----------------------1--1111---12--------------------------122-------------------------------------------------1------------------1--------1---------1-------------------------------------------------111----------------------------------------------------------------------------1---------------------------------121------------------------------------------------------------1---------------------------------1-------1-----------------------------1111------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 189 STR:RPRED 97.4 SQ:SECSTR #####HHTcccccccHHHHHHHHHHHHHHHHHHHccGGGccHHHHHHHTccHHHHHHHcccHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHccccTTTcGGGTHHHHHHHHHHHHHTcccccHHHHHHHHHHHHHHHHHHHHHHTTcccHHHHHHHHHHHHHcHcc DISOP:02AL 1-23| PSIPRED ccccccccccccccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHccccccHHcccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccc //