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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC68221.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  68/915 : Eukaryota  14/199 : Viruses  0/175   --->[See Alignment]
a.211.1d.17.4
:349 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   38->127 2cqzA PDBj 6e-04 16.2 %
:RPS:PDB   243->339 3bb9F PDBj 2e-09 16.7 %
:RPS:SCOP  37->121 2pq7A1  a.211.1.1 * 1e-04 26.9 %
:RPS:SCOP  247->347 2gxfA1  d.17.4.22 * 1e-09 20.0 %
:HMM:SCOP  230->344 1qjgA_ d.17.4.3 * 4.2e-15 24.8 %
:RPS:PFM   92->158 PF10145 * PhageMin_Tail 5e-04 35.8 %
:RPS:PFM   237->349 PF02136 * NTF2 3e-06 37.5 %
:HMM:PFM   38->163 PF01966 * HD 7.3e-09 24.5 110/118  
:HMM:PFM   243->308 PF02136 * NTF2 2.1e-05 31.8 66/118  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68221.1 GT:GENE BAC68221.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION complement(655559..656608) GB:FROM 655559 GB:TO 656608 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:NOTE PF01966: HD domain GB:PROTEIN_ID BAC68221.1 LENGTH 349 SQ:AASEQ MTTAADLSVFEQLDLPDTSLTRDTFAFAAQATPAFIHDHCVRSYVFARAHAQNQGLRAGTDYDDELLFVSCVLHDLGLSEEGSNGDQRFEVDGADIAAAFLRERGVEEERIAVAWDAIALHTSEGIASRKGTEVALAHLGIATDILGIQRESLPAGLADEVHALLPRQDLAHGFSDLIITQAVAKPHKASPTNFIGDLLRRHLPYGAYPNWYDLIDAAGWGDKPVGVTARRRAETPQQVGTLFMEYLEAGDVEGLVSLYEPNAHFVPTPGTHLVGTDAIREAMRQMVDSGARLKLEQREIRQVDDIALVSNNAILTGIGPEPVVSTTTEILRRQPDGGWVHAVDDPFFS GT:EXON 1|1-349:0| SEG 24->35|tfafaaqatpaf| RP:PDB:NREP 2 RP:PDB:REP 38->127|2cqzA|6e-04|16.2|80/173| RP:PDB:REP 243->339|3bb9F|2e-09|16.7|96/115| RP:PFM:NREP 2 RP:PFM:REP 92->158|PF10145|5e-04|35.8|67/202|PhageMin_Tail| RP:PFM:REP 237->349|PF02136|3e-06|37.5|104/115|NTF2| HM:PFM:NREP 2 HM:PFM:REP 38->163|PF01966|7.3e-09|24.5|110/118|HD| HM:PFM:REP 243->308|PF02136|2.1e-05|31.8|66/118|NTF2| GO:PFM:NREP 2 GO:PFM GO:0005622|"GO:intracellular"|PF02136|IPR002075| GO:PFM GO:0006810|"GO:transport"|PF02136|IPR002075| RP:SCP:NREP 2 RP:SCP:REP 37->121|2pq7A1|1e-04|26.9|78/174|a.211.1.1| RP:SCP:REP 247->347|2gxfA1|1e-09|20.0|95/119|d.17.4.22| HM:SCP:REP 230->344|1qjgA_|4.2e-15|24.8|113/125|d.17.4.3|1/1|NTF2-like| OP:NHOMO 121 OP:NHOMOORG 82 OP:PATTERN -------------------------------------------------------------------- --1-1---------211-------13-----1-2122331-2-11----11----1----11---1-12---------------------------------1--3-------------------------------------------------------------------------------------------------------------------1----------1-------------------1---------------------------------------------------------------------------------------------------------------------------1----------2----------------------111--1---2---------13----------------1---------1-1--------------------------------------------23111131----1146------2-2-2------------1-----1--------------------------------------------------1-------------------------------------------------------------------------------------------------------------------1---------------------------------------------------------------------------1-1--------1--111---------------------------------------------------------------------------------------------------------- ----------------11--------1---------------------141-22---11111------------------------------1---------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 203 STR:RPRED 58.2 SQ:SECSTR #####################################HHHHHHHHHHHHHHHHHHHT#TccccHHHHHHHHHHTTTTHHHHc#####cccTTTTTTccHHHHHHHHHHHTc####GGGHHHHHHHHH################################################################################################HHHHHHHHcTTcHHHHHHHHHHHHHHTcHHHHHHHEEEEEEEEEcTTEEEccHHHHHHTHHHHHHHHTEEEEEEEEEEEETTEEEEEEEEEEEEEETEEEEEEEEEEEEEcTTccEEEEEEcH### DISOP:02AL 1-4| PSIPRED ccccccHHHHHcccccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHccccHHHccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHccccHHHccHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHccccccccHHHHHccccccccccccccccccccHHHHHHHHHHHHHcccHHHHHHEEccccEEEccccEEEccHHHHHHHHHHHHHcccccEEccccHHHHcHHHHHHcccEEEcccccccHHHHHHHHHHcccccEEEEccccccc //