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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC68233.1
DDBJ      :             putative Tn3 family ISSod9-like transposase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  127/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
:361 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   185->295 2azoA PDBj 9e-23 8.8 %
:RPS:PFM   55->334 PF01526 * Transposase_7 1e-52 37.6 %
:HMM:PFM   53->334 PF01526 * Transposase_7 4.4e-53 29.9 281/968  
:BLT:SWISS 53->334 TNP9_ECOLX 2e-31 29.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68233.1 GT:GENE BAC68233.1 GT:PRODUCT putative Tn3 family ISSod9-like transposase GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION complement(666194..667279) GB:FROM 666194 GB:TO 667279 GB:DIRECTION - GB:PRODUCT putative Tn3 family ISSod9-like transposase GB:NOTE Tn3 family GB:PROTEIN_ID BAC68233.1 LENGTH 361 SQ:AASEQ MSAWKVDGEGAGVRQEWSLEDVVACWTLVEGDRDLVANKSGPTRLGFCLMLKAALRHVRRYFITVDNLRAAVRKLVNATFAARDAAWWGQGTACASDSKKFGSWSSNFMTEYHARYGGNGVMIYWHVEKKNVCIYSKLKSCSSSEVAAMIEGLLRHCTDAEIEANYVDTHGASVVGFALTELLNFRLLPRLKNMGSIRLYRPDDSPPGWPALGASLTRPIKWDPIAQQYDQMVKYATALRLGTAEAEQVLRRFTRGGPKHPTYAALEELGRAVRTIFACDYLASPDLRREIHGGLQVVENWNSANTVLHYGKDGALTGPDKEHAETSMLALHLLCGPHSCTSHPAGAAGPGRAGLGEEAHR GT:EXON 1|1-361:0| BL:SWS:NREP 1 BL:SWS:REP 53->334|TNP9_ECOLX|2e-31|29.2|281/988| SEG 344->359|pagaagpgraglgeea| RP:PDB:NREP 1 RP:PDB:REP 185->295|2azoA|9e-23|8.8|102/218| RP:PFM:NREP 1 RP:PFM:REP 55->334|PF01526|1e-52|37.6|279/950|Transposase_7| HM:PFM:NREP 1 HM:PFM:REP 53->334|PF01526|4.4e-53|29.9|281/968|Transposase_7| GO:PFM:NREP 3 GO:PFM GO:0003677|"GO:DNA binding"|PF01526|IPR002513| GO:PFM GO:0004803|"GO:transposase activity"|PF01526|IPR002513| GO:PFM GO:0006313|"GO:transposition, DNA-mediated"|PF01526|IPR002513| OP:NHOMO 269 OP:NHOMOORG 128 OP:PATTERN -------------------------------------------------------------------- -------------1----------------------212---11--------2-3-----12---1-1-2--------------------------------------------------------------------------1-7214-------------------4--------------2----------1-11--1--32-15------------------------2-------------------------------1--------------------------2---------------------------------1--------------------------------1------------------------------------------------4-------2-23--111----------1---1---1-------------5--1------------------------------------6------2-12--------43-1-1----1A2-12C--53--527-1-4----13-1-----------13-------------1--------1----6------------------------------------2-241------4----1-3--1-2-------------------1---11-------1-----112-------1-----13-2----------6-----1---31----------1-111-11-1---1----------------------1-------3---2--------13------1--111111---------1------1------1-41712--1--------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 176 STR:RPRED 48.8 SQ:SECSTR ###########################################################################################################################HHHHHHHTTccccccTTTcTTHHHHHHHHHTHHccccEEEEEEEcTTcccEccccccTTccEEEEEccTTccGGGccEEEEccccccEEEcccccHHHHHHHHHHHHHHHHHHHTTcGGGccTTcccccEEEEEcccccEEEEcTTccEEEEccEEEEEcHHHHHHHHHGGGTccc############################################################## DISOP:02AL 1-2, 6-7, 349-361| PSIPRED cccEEcccccccccccccHHHHHHHHHHHcccHHHHHHcccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccHHcccccEEEEccEEEEcccccccccccccccccccEEEEEEEcccEEEEEEEEcccHHHHHHHHHHHHHcccccEEEEEEcccccHHHHHHHHHHHHccccccccccccccEEEEcccccccHHHHHHHccccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHccccccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEcccHHHHHHHHHHHHHHccccccccccccccccccccccccccc //