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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC68250.1
DDBJ      :             putative MerR-family transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  59/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.6.1
:133 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->114 1q05A PDBj 7e-06 25.5 %
:RPS:PDB   1->107 3d70A PDBj 1e-15 18.3 %
:RPS:SCOP  1->103 1jbgA  a.6.1.3 * 1e-13 24.0 %
:HMM:SCOP  1->112 1jbgA_ a.6.1.3 * 3.2e-21 38.2 %
:RPS:PFM   3->36 PF00376 * MerR 8e-05 55.9 %
:HMM:PFM   2->36 PF00376 * MerR 1.9e-14 51.4 35/38  
:HMM:PFM   41->108 PF09278 * MerR-DNA-bind 8.1e-09 31.2 64/65  
:BLT:SWISS 9->110 MERR_THIFE 2e-10 36.7 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68250.1 GT:GENE BAC68250.1 GT:PRODUCT putative MerR-family transcriptional regulator GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION complement(683712..684113) GB:FROM 683712 GB:TO 684113 GB:DIRECTION - GB:PRODUCT putative MerR-family transcriptional regulator GB:NOTE PF00376: MerR family regulatory protein GB:PROTEIN_ID BAC68250.1 LENGTH 133 SQ:AASEQ MKEMVRHTGVHERLLRYYEQQGLLAPARLPSGYRIYSESDVETVRRIRCLLAAGLPTSLIAQVLPCIRTDDDRLVPTCPDLVAQLAQERERITRAIKELQASRTMLDTVIAAAPVQGAETLRSPQPDADEASY GT:EXON 1|1-133:0| BL:SWS:NREP 1 BL:SWS:REP 9->110|MERR_THIFE|2e-10|36.7|98/122| BL:PDB:NREP 1 BL:PDB:REP 1->114|1q05A|7e-06|25.5|110/122| RP:PDB:NREP 1 RP:PDB:REP 1->107|3d70A|1e-15|18.3|104/276| RP:PFM:NREP 1 RP:PFM:REP 3->36|PF00376|8e-05|55.9|34/37|MerR| HM:PFM:NREP 2 HM:PFM:REP 2->36|PF00376|1.9e-14|51.4|35/38|MerR| HM:PFM:REP 41->108|PF09278|8.1e-09|31.2|64/65|MerR-DNA-bind| GO:PFM:NREP 2 GO:PFM GO:0003700|"GO:transcription factor activity"|PF00376|IPR000551| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00376|IPR000551| RP:SCP:NREP 1 RP:SCP:REP 1->103|1jbgA|1e-13|24.0|100/106|a.6.1.3| HM:SCP:REP 1->112|1jbgA_|3.2e-21|38.2|102/106|a.6.1.3|1/1|Putative DNA-binding domain| OP:NHOMO 79 OP:NHOMOORG 59 OP:PATTERN -------------------------------------------------------------------- ----1---------1----------2-------------2-1242-12-11-1--------2--3-33221-------------------------------------------------------------------1----------------------------------------------2------1------111-111111------111--------------2----------------------1-----------------------2-------11------------------------1-------------------------------------------------------------------------------1-------------------------------1------1---------1-11-----------1--------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------1----------1------------------------------------------------------1-1111111------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 124 STR:RPRED 93.2 SQ:SECSTR HHHHHHHHTccHHHHHHHHHTTccccccTTTccEEEcGGGGGHHHHHHHHHHHTccHHHHHHHTHHHTccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTccccGGGTTTcc######### DISOP:02AL 119-133| PSIPRED cHHHHHHHcccHHHHHHHHHHccccccccccccEEccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHcc //