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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC68264.1
DDBJ      :             putative LacI-family transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  573/915 : Eukaryota  5/199 : Viruses  0/175   --->[See Alignment]
a.35.1c.93.1
:340 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   10->307 1jh9A PDBj 8e-37 34.0 %
:RPS:PDB   10->340 1bdhA PDBj 2e-53 29.4 %
:RPS:SCOP  10->64 1bdhA1  a.35.1.5 * 7e-15 50.9 %
:RPS:SCOP  69->339 1rzrA2  c.93.1.1 * 1e-49 24.8 %
:HMM:SCOP  7->65 1efaA1 a.35.1.5 * 2.5e-18 52.5 %
:HMM:SCOP  67->341 1dbqA_ c.93.1.1 * 4.9e-73 42.6 %
:RPS:PFM   10->55 PF00356 * LacI 3e-05 52.2 %
:RPS:PFM   84->308 PF00532 * Peripla_BP_1 6e-34 44.1 %
:HMM:PFM   80->320 PF00532 * Peripla_BP_1 1.2e-29 28.3 240/279  
:HMM:PFM   10->55 PF00356 * LacI 2.3e-19 58.7 46/46  
:BLT:SWISS 1->339 CELR_THEFU 2e-78 48.7 %
:PROS 11->29|PS00356|HTH_LACI_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68264.1 GT:GENE BAC68264.1 GT:PRODUCT putative LacI-family transcriptional regulator GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION 701238..702260 GB:FROM 701238 GB:TO 702260 GB:DIRECTION + GB:PRODUCT putative LacI-family transcriptional regulator GB:NOTE PF00532: Periplasmic binding proteins and sugar binding domain of the LacI family GB:PROTEIN_ID BAC68264.1 LENGTH 340 SQ:AASEQ MGRRRPGAPTLEEVAAHAGVGRGTVSRVINNAAGVKESTRRAVQQAIQELGYVPNLAARSLAGQRADAVALVLTEPDWRQFAEPFFSEIVRSLGDALADTGMQLLLTLVRSDAERQRFLEFARGGRVDGALLVSVHDGDLLPDMLVEAGLPTVLLGRRSGDEYVSYVDADNVGGARSAVSHLLKRGRRAIATVTGPLDMHVAQCRLRGYQEALAMAGLRGEPSWVAESDFTEESGRRAMAELIERHPEIDGVIAASDTTAAGALQALHAAGRRVPEDVAVIGFDDFPLAQQTKPRLTTVRQPLEEIGRAMVRLLLEEVEEPAVAWHHVILRTELVVRESA GT:EXON 1|1-340:0| BL:SWS:NREP 1 BL:SWS:REP 1->339|CELR_THEFU|2e-78|48.7|337/340| PROS 11->29|PS00356|HTH_LACI_1|PDOC00366| SEG 260->271|aagalqalhaag| SEG 309->324|amvrllleeveepava| BL:PDB:NREP 1 BL:PDB:REP 10->307|1jh9A|8e-37|34.0|291/339| RP:PDB:NREP 1 RP:PDB:REP 10->340|1bdhA|2e-53|29.4|326/338| RP:PFM:NREP 2 RP:PFM:REP 10->55|PF00356|3e-05|52.2|46/46|LacI| RP:PFM:REP 84->308|PF00532|6e-34|44.1|222/261|Peripla_BP_1| HM:PFM:NREP 2 HM:PFM:REP 80->320|PF00532|1.2e-29|28.3|240/279|Peripla_BP_1| HM:PFM:REP 10->55|PF00356|2.3e-19|58.7|46/46|LacI| GO:PFM:NREP 3 GO:PFM GO:0003700|"GO:transcription factor activity"|PF00356|IPR000843| GO:PFM GO:0005622|"GO:intracellular"|PF00356|IPR000843| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00356|IPR000843| RP:SCP:NREP 2 RP:SCP:REP 10->64|1bdhA1|7e-15|50.9|55/56|a.35.1.5| RP:SCP:REP 69->339|1rzrA2|1e-49|24.8|266/272|c.93.1.1| HM:SCP:REP 7->65|1efaA1|2.5e-18|52.5|59/59|a.35.1.5|1/1|lambda repressor-like DNA-binding domains| HM:SCP:REP 67->341|1dbqA_|4.9e-73|42.6|270/282|c.93.1.1|1/1|Periplasmic binding protein-like I| OP:NHOMO 4497 OP:NHOMOORG 578 OP:PATTERN -------------------------------------------------------------------- 8893t12577B111-2211-11--1D111111322224BG6-3DNhQ1GHC2SPP-16--867AV6OPWJ6ECCCFKJ2---4-----1111-1-----1-7-319-749--------------------------78854---D----------------------1-1-------------58222DC-B7ABBBAB98C7BAA989EDCCA9AB869D29578999994O54444444444444442246A671761A213886655544886445777754543355555455555443433444444455622266668417D22222227276511478AG4321218--------H1-489991-21-1FCC4-----3-643--------4434344434A---3--3135E--RGGETPQccUOM669156C85545746--------33311--1------------------------------3927125524ACDDCA8433377BI656548AA93554--6669151155826F----1--3----------------1----1--3------------------F-----------------------------ABG6-77-84A5454633322312233115-------------JKJG6JDCCCDCDEDDB-CBACFCBCDECCCEFAEFCMQMJJ667DFBCDDDDDDCCDCBCP99BBBBD6-IFGGFGGEFGGG---------------86C444748133333334----------6844443648244451566----------9789BBBBBCA9FE87AAAAA888-------1----------------5-------------------------567623A545-3- -------------1------------------------------------------------------------------------------------------------------------------------------------------------1--------------1-----------2--------5---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 337 STR:RPRED 99.1 SQ:SECSTR ###ccTTcccHHHHHHHHTccHHHHHHHHHTcccccHHHHHHHHHHHHHHTccccHHHHHHHHTcccEEEEEEcccccEcTTcHHHHHHHHHHHHHHHHTTcEEEEEEcTTcHHHHHHHHHHHHTTccEEEEcccccHHHHHHHHTTTTccEEEccccccccccEEEEccHHHHHHHHHHHHHHTTcccEEEEcccTTcHHHHHHHHHHHHHHHHTTccccGGGcccccccHHHHHHHHHHHHcccccccEEEEccHHHHHHHHHHHHHTTccTTTTcEEEEEEccTTGGGccccccEEEccHHHHHHHHHHHHHHHHHTccccccEEEcccEEEccccc DISOP:02AL 1-6, 8-11, 57-65| PSIPRED ccccccccccHHHHHHHHcccHHHHHHHccccccccHHHHHHHHHHHHHHcccccHHHHHHHcccccEEEEEEEcccccccccHHHHHHHHHHHHHHHHcccEEEEEEccccHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHccccEEEEEcccccccccEEEEcHHHHHHHHHHHHHHccccEEEEEEcccccHHHHHHHHHHHHHHHHcccccccEEEEcccccHHHHHHHHHHHHHccccccEEEEEcHHHHHHHHHHHHHccccccccEEEEEEccHHHHHHccccEEEEEccHHHHHHHHHHHHHHHHccccccccEEEEEEEEEEEccc //