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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC68277.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  9/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.110.2
:481 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   157->309 3dbaA PDBj 4e-06 9.2 %
:RPS:SCOP  161->309 1mc0A1  d.110.2.1 * 8e-05 9.5 %
:HMM:SCOP  177->338 1mc0A2 d.110.2.1 * 8.2e-15 30.9 %
:RPS:PFM   1->127 PF06248 * Zw10 2e-04 27.5 %
:HMM:PFM   177->324 PF01590 * GAF 2.2e-13 37.3 102/154  
:HMM:PFM   93->133 PF11919 * DUF3437 0.00085 34.1 41/90  
:BLT:SWISS 75->253 QUEF_POLSJ 5e-04 24.9 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68277.1 GT:GENE BAC68277.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION 717968..719413 GB:FROM 717968 GB:TO 719413 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:NOTE PF01590: GAF domain GB:PROTEIN_ID BAC68277.1 LENGTH 481 SQ:AASEQ MDLTADSLLSRAAHELSPRADEVIHDVEQCLRREIPELWDEPDIAQMTRENVAEHVVALLFGIEHSIEPRRIDQPAADAERARRLAQRGKPVTAMLRAFPLAHARVLDRLLEELPRLTSDAESINAAARKLIALSIAYMARTSETGVLAFQEERDRQLQWRLSVVNEASVRVGTTLDIARTAQELVDLATEHFADAVTVDLLDMPSGDEPPAKGTLVVRRIAQQSVMDGYPETTSLEAIYGELPVSPQQVHRYPDGSPPARALATGRPSRHHLGPSASMLLVPLCARGTTLGVVQFFRHHRPDAYGDEDLLLAQEVAARAAVAIDNARRYTHARATALTLQRSLLPRRHPRSPPWRSPAATCLLPPSSAWAATGTTSSRCPVPGSHSWWATWSATASTPPPPWAGCGPPCAPSPTSTCRPTNSSPTWTTSSSACPPKSLPKPLPKRTPNPQGTSGPPACTPYTIPSPAAAPSPARATCCPS GT:EXON 1|1-481:0| BL:SWS:NREP 1 BL:SWS:REP 75->253|QUEF_POLSJ|5e-04|24.9|169/100| SEG 310->329|lllaqevaaraavaidnarr| SEG 340->358|lqrsllprrhprsppwrsp| SEG 367->378|ssawaatgttss| SEG 387->445|swwatwsatastppppwagcgppcapsptstcrptnssptwttsssacppkslpkplpk| SEG 465->474|pspaaapspa| RP:PDB:NREP 1 RP:PDB:REP 157->309|3dbaA|4e-06|9.2|153/171| RP:PFM:NREP 1 RP:PFM:REP 1->127|PF06248|2e-04|27.5|120/538|Zw10| HM:PFM:NREP 2 HM:PFM:REP 177->324|PF01590|2.2e-13|37.3|102/154|GAF| HM:PFM:REP 93->133|PF11919|0.00085|34.1|41/90|DUF3437| GO:PFM:NREP 3 GO:PFM GO:0000775|"GO:chromosome, centromeric region"|PF06248|IPR009361| GO:PFM GO:0005634|"GO:nucleus"|PF06248|IPR009361| GO:PFM GO:0007067|"GO:mitosis"|PF06248|IPR009361| RP:SCP:NREP 1 RP:SCP:REP 161->309|1mc0A1|8e-05|9.5|137/187|d.110.2.1| HM:SCP:REP 177->338|1mc0A2|8.2e-15|30.9|136/0|d.110.2.1|1/1|GAF domain-like| OP:NHOMO 32 OP:NHOMOORG 9 OP:PATTERN -------------------------------------------------------------------- ----2----------------1--3------3----------1------------------------D531---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 239 STR:RPRED 49.7 SQ:SECSTR #####################################################################TEEEEEcTTcT#TEEEEccGGGTTTccEEEEEETEEEEccTTcEEEEEEGGGcEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHTTccccccHHHHHHHHHHHHHHHHHEEEEEEEEEEEETEEEEEEEEEEEcTTccHHHHcccGGGccEEcTTccHHHHHHHHTccEEEccGGGcTTcccHHHHHHccccccEEEEEEEETTEEEEEEEEEEEcccccccHHH############################################################################################################################################################################ DISOP:02AL 333-355, 387-481| PSIPRED ccEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHcccccEEEEEccccccccHHHccccccHHHccEEcccccHHHHHHHccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccEEEEEEEcccccccccccccccccHHHHHccccccccccccccccccccccccccEEccccccHHHHcccccccHHHcccccEEEEEEEEEccEEEEEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc //