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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC68286.1
DDBJ      :             putative TetR-family transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  43/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.121.1a.4.1
:218 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   17->115 2optB PDBj 6e-12 35.4 %
:RPS:PDB   19->148 3b6cB PDBj 2e-14 29.2 %
:RPS:SCOP  12->79 2oi8A1  a.4.1.9 * 3e-10 17.6 %
:RPS:SCOP  87->218 2g7lA2  a.121.1.1 * 4e-14 12.4 %
:HMM:SCOP  16->87 1zk8A1 a.4.1.9 * 2.4e-11 27.8 %
:HMM:SCOP  85->215 2g7gA2 a.121.1.1 * 1.3e-16 27.7 %
:HMM:PFM   24->67 PF00440 * TetR_N 3.7e-13 31.8 44/47  
:HMM:PFM   82->163 PF02909 * TetR_C 2.5e-09 24.7 81/139  
:BLT:SWISS 18->122 TETR5_ECOLX 1e-09 36.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68286.1 GT:GENE BAC68286.1 GT:PRODUCT putative TetR-family transcriptional regulator GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION 730897..731553 GB:FROM 730897 GB:TO 731553 GB:DIRECTION + GB:PRODUCT putative TetR-family transcriptional regulator GB:NOTE PF00440: Bacterial regulatory proteins, tetR family GB:PROTEIN_ID BAC68286.1 LENGTH 218 SQ:AASEQ MATERKPPRGTRKRDVPLTKDGICAMALQLIDADGVEALTMRKLATALDANPMSLYHHVPNKDAVLRGVAHRVGSQFSAGQREDVPWQDQLRELARDFRELSHRHPKLMGYSFTRPDYVQPEDPFWQALIDILAAAKLPDEEIPRVAATLVGVFTGLLLGELNGALQRWATLPPAPSGPDGEDAPPPSKDVIDTMFNSALDAAVSGVENHVARVREGA GT:EXON 1|1-218:0| BL:SWS:NREP 1 BL:SWS:REP 18->122|TETR5_ECOLX|1e-09|36.2|105/211| SEG 149->162|tlvgvftglllgel| BL:PDB:NREP 1 BL:PDB:REP 17->115|2optB|6e-12|35.4|99/205| RP:PDB:NREP 1 RP:PDB:REP 19->148|3b6cB|2e-14|29.2|130/203| HM:PFM:NREP 2 HM:PFM:REP 24->67|PF00440|3.7e-13|31.8|44/47|TetR_N| HM:PFM:REP 82->163|PF02909|2.5e-09|24.7|81/139|TetR_C| RP:SCP:NREP 2 RP:SCP:REP 12->79|2oi8A1|3e-10|17.6|68/79|a.4.1.9| RP:SCP:REP 87->218|2g7lA2|4e-14|12.4|129/133|a.121.1.1| HM:SCP:REP 16->87|1zk8A1|2.4e-11|27.8|72/0|a.4.1.9|1/1|Homeodomain-like| HM:SCP:REP 85->215|2g7gA2|1.3e-16|27.7|130/0|a.121.1.1|1/1|Tetracyclin repressor-like, C-terminal domain| OP:NHOMO 68 OP:NHOMOORG 43 OP:PATTERN -------------------------------------------------------------------- ----4---------5-1--------1------11113342-11214-------11--1--211-2132211------------------------------------------------------------------------------------------------------------------1-----------------------------------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------1---------------------------------11--1-------------------------------1------------------------------------------1111---------1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 205 STR:RPRED 94.0 SQ:SECSTR ######HHHHHHTccHHHcHHHHHHHHHHHHHHHcGGGccHHHHHHHHTccHHHHHHHHccHHHHHHHHHHHHGGGcccccccTTcHHHHHHHHHHHHHHHHHHcTTHHHHHTTcccccHHHHHHHHHHHHHHHHTTccHHHHHHHHH###HHHHHHHHHHHHHHHHHHHHTcccccHHHHHHHcccHHHHHHTccTTTcHHHHHTHHHHHccc#### DISOP:02AL 1-22, 215-218| PSIPRED cccccccccccccccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHcccccccEEEcccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc //