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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC68340.1
DDBJ      :             putative LacI-family transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  557/915 : Eukaryota  5/199 : Viruses  0/175   --->[See Alignment]
a.35.1c.93.1
:351 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   22->337 1zvvA PDBj 3e-29 27.8 %
:RPS:PDB   20->345 1efaA PDBj 8e-49 26.9 %
:RPS:SCOP  22->77 1bdhA1  a.35.1.5 * 2e-14 44.6 %
:RPS:SCOP  81->345 1rzrA2  c.93.1.1 * 1e-44 23.6 %
:HMM:SCOP  19->77 1efaA1 a.35.1.5 * 1.6e-17 57.6 %
:HMM:SCOP  80->345 1dbqA_ c.93.1.1 * 7.2e-64 40.0 %
:RPS:PFM   22->67 PF00356 * LacI 4e-07 56.5 %
:RPS:PFM   79->321 PF00532 * Peripla_BP_1 7e-30 38.1 %
:HMM:PFM   80->342 PF00532 * Peripla_BP_1 1.8e-27 26.5 257/279  
:HMM:PFM   22->67 PF00356 * LacI 7.7e-19 52.2 46/46  
:BLT:SWISS 20->343 DEGA_BACSU 8e-36 29.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68340.1 GT:GENE BAC68340.1 GT:PRODUCT putative LacI-family transcriptional regulator GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION complement(783885..784940) GB:FROM 783885 GB:TO 784940 GB:DIRECTION - GB:PRODUCT putative LacI-family transcriptional regulator GB:NOTE PF00532: Periplasmic binding proteins and sugar binding domain of the LacI family GB:PROTEIN_ID BAC68340.1 LENGTH 351 SQ:AASEQ MEGWSSTHVSSRPPHRQNTRPTMRDVAERAGVALVTVSRVVNGVGTVREETAERVMAAINAIGYQRNELARSLRPGQNSMTIGLLLGDLTNPFYASLAKAAVEVANRAGYAVLLSTADEDPEVERRAVGELIGRRVAGLIIVPDQGDHAFLNEINGHDHVPIVFVDRPATGAEADVVLVDNEDGGRKATQHLIDQGHRRIAILGAPSYYSTGRRLRGYRKALRRSGITPDSNLVVTLRRGTTEEASAATHTLLTSADPPTAVFSTTGFLTEGVLRACRQLQTSVAIVGFDDFKLADMLPTPVTVVTSDTEELGRHAARLLLDRIDGDDAPSRRTVLPVQLIARGTGEIGTQ GT:EXON 1|1-351:0| BL:SWS:NREP 1 BL:SWS:REP 20->343|DEGA_BACSU|8e-36|29.0|321/337| SEG 212->224|grrlrgyrkalrr| SEG 241->256|tteeasaathtlltsa| BL:PDB:NREP 1 BL:PDB:REP 22->337|1zvvA|3e-29|27.8|309/332| RP:PDB:NREP 1 RP:PDB:REP 20->345|1efaA|8e-49|26.9|320/328| RP:PFM:NREP 2 RP:PFM:REP 22->67|PF00356|4e-07|56.5|46/46|LacI| RP:PFM:REP 79->321|PF00532|7e-30|38.1|239/261|Peripla_BP_1| HM:PFM:NREP 2 HM:PFM:REP 80->342|PF00532|1.8e-27|26.5|257/279|Peripla_BP_1| HM:PFM:REP 22->67|PF00356|7.7e-19|52.2|46/46|LacI| GO:PFM:NREP 3 GO:PFM GO:0003700|"GO:transcription factor activity"|PF00356|IPR000843| GO:PFM GO:0005622|"GO:intracellular"|PF00356|IPR000843| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00356|IPR000843| RP:SCP:NREP 2 RP:SCP:REP 22->77|1bdhA1|2e-14|44.6|56/56|a.35.1.5| RP:SCP:REP 81->345|1rzrA2|1e-44|23.6|263/272|c.93.1.1| HM:SCP:REP 19->77|1efaA1|1.6e-17|57.6|59/59|a.35.1.5|1/1|lambda repressor-like DNA-binding domains| HM:SCP:REP 80->345|1dbqA_|7.2e-64|40.0|265/282|c.93.1.1|1/1|Periplasmic binding protein-like I| OP:NHOMO 4099 OP:NHOMOORG 562 OP:PATTERN -------------------------------------------------------------------- 7562j-1467A1-------------B------2111239C7-2BLZO1GEC2SPQ-16--4369Q5LNOE5B788EHG4---4-----1111-1-----1-7-419-749--------------------------66754---C----------------------1-1-------------47-22AA-B79BBBAB97C7BAA979DC9988AB758E28577888894M433333333333333311449471542A214995556543774444777755643455555455555555544555455444513255578416B222222282844114659C4321224--------H1-489A81-2--1EBB4-----4-654--------5544455444A---2--5115A--NFFCLKIURPKH658147B75544846--------333-1--1------------------------------2826125524ABCDBA73222779G5454389A83444--6658-51144825D----1--31---------------1----11-3------------------9-----------------------------AAB5-77-8385343533311212233114-------------IIHG7HEDCCDDEEECC-CCACFCBCEECDCEFBEFBMOLGF777BDAABBBBBBAABA9ANAABBBAD7-HDEEDDEDEEDD---------------87A444758133334336----------7744443658244451766----------A897BBBBBB99DD66999997871111--------------------3-------------------------5464139544--- -------------1------------------------------------------------------------------------------------------------------------------------------------------------1-----------2--------------1--------3---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 346 STR:RPRED 98.6 SQ:SECSTR #cTTcTHHHHccccTTcTTcccHHHHHHTTTccHHHHHHHHTTcccccTHHHHHHHHHHHHHTccccHHHHHHTTTccccEEEEEEccTTcHHHHHHHHHHHHHHHHTTcEEEEEEccccHHHHHHHHHHHHHTTccEEEEEccccHHHHHHHHHHccccccEEEccccTTccccEEEEcHHHHHHHHHHHHHHTTcccEEEEccTTcHHHHHHHHHHHHHHHTTTccccEEEEccccHcHHHHHHHHHHHHHHTTccccEEEEccHHHHHHHHHHHHTTTcccEEEEEEccGGGGGccccccEEEccHHHHHHHHHHHHHHHHTTccccccEEEEccEEEccccTc#### DISOP:02AL 1-24, 72-73, 346-351| PSIPRED ccccccccccccccccccccccHHHHHHHHcccHHHHHHHccccccccHHHHHHHHHHHHHHcccccHHHHHHHcccccEEEEEEEcccccHHHHHHHHHHHHHHHHcccEEEEEEccccHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHccccEEEEEcccccccccEEEEcHHHHHHHHHHHHHHccccEEEEEEccccHHHHHHHHHHHHHHHHccccccccEEEEcccccHHHHHHHHHHHHHccccccEEEEccHHHHHHHHHHHHHccccEEEEEEcccHHHHHccccEEEEEccHHHHHHHHHHHHHHHHccccccccEEEEccEEEEccccccccc //