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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC68365.1
DDBJ      :             putative DNA-binding protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  119/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.35.1
:286 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   1->60 3bdnA PDBj 3e-04 25.0 %
:RPS:SCOP  29->63 1b0nA2  a.35.1.3 * 2e-04 28.6 %
:HMM:SCOP  29->81 2bnmA1 a.35.1.3 * 7.9e-06 39.6 %
:HMM:PFM   30->79 PF01381 * HTH_3 1.9e-10 40.8 49/55  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68365.1 GT:GENE BAC68365.1 GT:PRODUCT putative DNA-binding protein GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION 812915..813775 GB:FROM 812915 GB:TO 813775 GB:DIRECTION + GB:PRODUCT putative DNA-binding protein GB:NOTE PF01381: Helix-turn-helix GB:PROTEIN_ID BAC68365.1 LENGTH 286 SQ:AASEQ MQRDQLADFLRHRREAISPGEVGIADGPRRRTAGLRREEVATLAGMSVDYVVRLEQGRSSQPSTQLLGALARALRLSDDERDHLFHLAGHRPPPADGVARLARAGMMRMLDLLGDTPALVLSDLGEVLAQNRAAVLLTGDLTGFLGDRRYVVYRYFTDPAARAVHPPEEREYHARQLVADLRAVAGRRSGDPTVAGLVDRLQTASADFRRLWAEHEVAVRRADRKTFQHPRVGHLVMDCETLVTPDQGQQLLVLTPADAEARERLELLRVLGIEEFPAAATDTPLR GT:EXON 1|1-286:0| SEG 66->82|llgalaralrlsdderd| SEG 136->147|lltgdltgflgd| SEG 257->269|adaearerlellr| RP:PDB:NREP 1 RP:PDB:REP 1->60|3bdnA|3e-04|25.0|44/234| HM:PFM:NREP 1 HM:PFM:REP 30->79|PF01381|1.9e-10|40.8|49/55|HTH_3| RP:SCP:NREP 1 RP:SCP:REP 29->63|1b0nA2|2e-04|28.6|35/68|a.35.1.3| HM:SCP:REP 29->81|2bnmA1|7.9e-06|39.6|53/0|a.35.1.3|1/1|lambda repressor-like DNA-binding domains| OP:NHOMO 276 OP:NHOMOORG 119 OP:PATTERN -------------------------------------------------------------------- ----J--1223---2------1---D------43335331-737833--21-453--3--32--G-86E2--------------------------------------------------------------------------1------------------------------------------------2-------------------------------------23-------------------------1--------------------------------------------------------------------2------------------------------------------------1--------11311---21------------------------2--1---11-122--1--1---------------------1-11-1-----------------------------------11112122121-111111121111112121112--11-------------1-----1--------------------------------------------------------------------------------1-----------1-----------------------1111-1-------------------------------22212-------------------2-------------------------------------1----------------------------1111----1--------------------------------11----------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 52 STR:RPRED 18.2 SQ:SECSTR HHHHHHHHHHHHHTTT############HHHHTTcccHHHHHHHTccHHHHHHHTTTTcccccG############################################################################################################################################################################################################################## DISOP:02AL 1-3, 19-21, 24-27, 95-101, 274-286| PSIPRED ccHHHHHHHHHHHHHHccHHHcccccccccccccccHHHHHHHHcccHHHHHHHHccccccccHHHHHHHHHHHcccHHHHHHHHHHHcccccccccccccccHHHHHHHHHHccccEEEEccccHHHHHcHHHHHHHccccccccccccEEHHHHccHHHHHHcccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHccHHHHHHHHccccccccccEEEEEcccEEEEEEEEEEccccccccEEEEEccccHHHHHHHHHHHccccccccccccccccc //