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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC68385.1
DDBJ      :             putative TetR-family transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  49/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.1
:263 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->77 2qwtA PDBj 1e-10 41.6 %
:RPS:PDB   9->68 3egqA PDBj 1e-10 23.3 %
:RPS:SCOP  2->72 2o7tA1  a.4.1.9 * 2e-15 32.4 %
:HMM:SCOP  1->78 1t33A1 a.4.1.9 * 1.5e-12 32.1 %
:RPS:PFM   12->57 PF00440 * TetR_N 6e-04 45.7 %
:HMM:PFM   12->57 PF00440 * TetR_N 1.6e-12 41.3 46/47  
:BLT:SWISS 1->63 Y2897_STAA8 8e-06 33.3 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68385.1 GT:GENE BAC68385.1 GT:PRODUCT putative TetR-family transcriptional regulator GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION complement(832592..833383) GB:FROM 832592 GB:TO 833383 GB:DIRECTION - GB:PRODUCT putative TetR-family transcriptional regulator GB:NOTE PF00440: Bacterial regulatory proteins, tetR family GB:PROTEIN_ID BAC68385.1 LENGTH 263 SQ:AASEQ MRADARKNRDHLLAVAGAAITEQGVDVSLRDIARRAEVGLATLLRHFPTREALLDALLHTSFDELTAKAGALGTGPGTYAAGPVGGREGGRCRRRVATARRNRRGHAGVRSGLVEGEGGDRKAVDEGDVERGETVVAHRLLAARDRRVGGRVVQSAQQLRRSGDLGGRPVTCPEVSPVLTVLKAEALADLGRAPVKGVSSSCSMVRQHRHPAGPPTSQLAGRRALCAPRHPHNHQLVINSGKGSAPRRLQDSVCSSAKIAITG GT:EXON 1|1-263:0| BL:SWS:NREP 1 BL:SWS:REP 1->63|Y2897_STAA8|8e-06|33.3|63/185| SEG 82->104|gpvggreggrcrrrvatarrnrr| SEG 139->152|rllaardrrvggrv| BL:PDB:NREP 1 BL:PDB:REP 1->77|2qwtA|1e-10|41.6|77/167| RP:PDB:NREP 1 RP:PDB:REP 9->68|3egqA|1e-10|23.3|60/154| RP:PFM:NREP 1 RP:PFM:REP 12->57|PF00440|6e-04|45.7|46/47|TetR_N| HM:PFM:NREP 1 HM:PFM:REP 12->57|PF00440|1.6e-12|41.3|46/47|TetR_N| GO:PFM:NREP 2 GO:PFM GO:0003700|"GO:transcription factor activity"|PF00440|IPR001647| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00440|IPR001647| RP:SCP:NREP 1 RP:SCP:REP 2->72|2o7tA1|2e-15|32.4|71/78|a.4.1.9| HM:SCP:REP 1->78|1t33A1|1.5e-12|32.1|78/0|a.4.1.9|1/1|Homeodomain-like| OP:NHOMO 82 OP:NHOMOORG 49 OP:PATTERN -------------------------------------------------------------------- -11-8---------1-------11-2--------1---11-6-711----------1---111-41-333---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--4--------11111-----------------------------1--1111--------------------------------22--------------------------------------------------------------------1--------1------------------------------------------------------------11--------------------------------------------------------------------------------------------------------------111------------------------------------------------------------1-----------------------------------------------------------------------1111------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 81 STR:RPRED 30.8 SQ:SECSTR cccHHHHHHHHHHHHHHHHHTccGGGccHHHHHHHHTccHHHHHHHcccHHHHHHHHHHHHHHHTcccHHHHHHHHHHHHH###################################################################################################################################################################################### DISOP:02AL 1-6, 157-164, 208-212, 243-244| PSIPRED cccHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHcccccHHccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccccccHHHHHccccccccccccccEEEEEcccccccHHHHHHHHccccEEEcc //