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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC68388.1
DDBJ      :             putative transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  20/68 : Bacteria  448/915 : Eukaryota  4/199 : Viruses  0/175   --->[See Alignment]
a.4.5
:120 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   17->106 2hztA PDBj 1e-17 55.4 %
:RPS:PDB   15->101 2d1hA PDBj 1e-09 10.6 %
:RPS:SCOP  15->108 1z7uA1  a.4.5.69 * 7e-31 48.4 %
:HMM:SCOP  8->109 2f2eA1 a.4.5.69 * 3e-31 43.8 %
:RPS:PFM   24->108 PF01638 * HxlR 4e-21 59.5 %
:HMM:PFM   23->109 PF01638 * HxlR 1.3e-34 57.0 86/91  
:BLT:SWISS 17->106 YTCD_BACSU 4e-22 51.7 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68388.1 GT:GENE BAC68388.1 GT:PRODUCT putative transcriptional regulator GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION 835665..836027 GB:FROM 835665 GB:TO 836027 GB:DIRECTION + GB:PRODUCT putative transcriptional regulator GB:NOTE PF01638: Transcriptional regulator GB:PROTEIN_ID BAC68388.1 LENGTH 120 SQ:AASEQ MTTLNRPGAPDGHVCGIDTVMEVIGGKWKVLILWALHERPHCRFGELRRLLPGITEKVLSSHLREMEADGVVHRVSYDEVPPRVEYSLTEDGTRLNDALQPLAAWGRERSTARGLEEGAG GT:EXON 1|1-120:0| BL:SWS:NREP 1 BL:SWS:REP 17->106|YTCD_BACSU|4e-22|51.7|89/126| BL:PDB:NREP 1 BL:PDB:REP 17->106|2hztA|1e-17|55.4|83/91| RP:PDB:NREP 1 RP:PDB:REP 15->101|2d1hA|1e-09|10.6|85/98| RP:PFM:NREP 1 RP:PFM:REP 24->108|PF01638|4e-21|59.5|84/91|HxlR| HM:PFM:NREP 1 HM:PFM:REP 23->109|PF01638|1.3e-34|57.0|86/91|HxlR| RP:SCP:NREP 1 RP:SCP:REP 15->108|1z7uA1|7e-31|48.4|93/108|a.4.5.69| HM:SCP:REP 8->109|2f2eA1|3e-31|43.8|96/0|a.4.5.69|1/1|"Winged helix" DNA-binding domain| OP:NHOMO 1162 OP:NHOMOORG 472 OP:PATTERN -------------11---------2112112---1----1---692-3-1331--------------1 1---9--2222---1------1---5------12224243-A4A33-1-11-421--3--211-4-6977------11--231-1-1-1211-12----1-9---X5A-1----------------------------------114-1222---111-----11-21221-------------------121699999A5936B978A468888818--15364211111AI1------1--11---2---13-4-22--1--432222322-2-243---1----23------------1111-1111111-11---11111--9H2223222141-6111-2121----1---341------1---2-311-1133------33433--13222-----------3-23142426161-6664641566235252--331--1-1211111111-323---2-----------------------------2-1112-----456383-22222231222222422--2-----41-1--11-11--2--1112------------1-111-1111-31111-11---11111---21-13-11-2121-1-1--------2---221--2--1----------1----------1--------------2137-3-1111111111-111111111111111111112164--11111--1---11111111111111--211111111111---------1111--422---211-----1--144344-1----111-11123------112-------------1-----1----321313211-1111---2---------------------1-------------------------------12 --------------------------------------------------------------------------------------------------------------------------------------------------------------1----1------3-----------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 119 STR:RPRED 99.2 SQ:SECSTR #ccEEEETTEEEEEGHHHHHHHTccHHHHHHHHHHHHHcccEEHHHHHHHHTTccHHHHHHHHHHHHHTTcEEEEEcccEEEEEcTTHHHHHHHHHHHHHHHHHHHHHHHTTTcHHHHHH DISOP:02AL 1-10, 117-120| PSIPRED ccccccccccccccccHHHHHHHHHccHHHHHHHHHHccccccHHHHHHHHccccHHHHHHHHHHHHHcccEEEEEccccccEEEEEccHHHHHHHHHHHHHHHHHHHHccccccccccc //