[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Streptomyces avermitilis MA-4680 (save0)
Gene : BAC68409.1
DDBJ      :             putative dehydrogenase
Swiss-Prot:             

Homologs  Archaea  5/68 : Bacteria  225/915 : Eukaryota  48/199 : Viruses  0/175   --->[See Alignment]
c.2.1
:307 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   36->233 1uznA PDBj 2e-12 29.4 %
:RPS:PDB   36->234 1a27A PDBj 3e-18 21.8 %
:RPS:SCOP  36->234 1bdbA  c.2.1.2 * 1e-19 18.4 %
:HMM:SCOP  16->248 1zemA1 c.2.1.2 * 5.3e-54 36.4 %
:RPS:PFM   36->182 PF00106 * adh_short 5e-12 33.3 %
:RPS:PFM   205->234 PF01648 * ACPS 7e-04 46.7 %
:HMM:PFM   22->182 PF00106 * adh_short 2e-32 27.8 158/167  
:BLT:SWISS 36->245 Y2049_STAEQ 5e-15 28.6 %
:PROS 152->180|PS00061|ADH_SHORT
:PROS 1->4|PS00228|TUBULIN_B_AUTOREG
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68409.1 GT:GENE BAC68409.1 GT:PRODUCT putative dehydrogenase GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION 853859..854782 GB:FROM 853859 GB:TO 854782 GB:DIRECTION + GB:PRODUCT putative dehydrogenase GB:NOTE PF00106: short chain dehydrogenase GB:PROTEIN_ID BAC68409.1 LENGTH 307 SQ:AASEQ MRDIGSVGGHSSPPGTPLRGRVAVVTGAARGVGEALAQRLSAAGMLVALLGREEETLRRAAASLPNRNIYVEADVTDHAALEDAARHVDNELGPASVVVANAGIAAGGPFTRTAADLWQRVIDVNLVGSANTARAFLPQLTHTRGYFLQIASTAAFGSAPMMSAYCASKAGAESFAQALRGEVERDGITVGIAYLHWTGTAMVAGIDDHPVLQALRRNQPRFARRVHTPAQVADWLTTGITHRAHHIYAPPWLRWCQPLRPLFPAVVARITRRELRTRSHTELAADVTVLGAGGLADWNSFLSRKHL GT:EXON 1|1-307:0| BL:SWS:NREP 1 BL:SWS:REP 36->245|Y2049_STAEQ|5e-15|28.6|196/230| PROS 152->180|PS00061|ADH_SHORT|PDOC00060| PROS 1->4|PS00228|TUBULIN_B_AUTOREG|PDOC00200| SEG 19->35|rgrvavvtgaargvgea| SEG 95->108|asvvvanagiaagg| BL:PDB:NREP 1 BL:PDB:REP 36->233|1uznA|2e-12|29.4|187/239| RP:PDB:NREP 1 RP:PDB:REP 36->234|1a27A|3e-18|21.8|197/285| RP:PFM:NREP 2 RP:PFM:REP 36->182|PF00106|5e-12|33.3|147/169|adh_short| RP:PFM:REP 205->234|PF01648|7e-04|46.7|30/67|ACPS| HM:PFM:NREP 1 HM:PFM:REP 22->182|PF00106|2e-32|27.8|158/167|adh_short| GO:PFM:NREP 5 GO:PFM GO:0008152|"GO:metabolic process"|PF00106|IPR002198| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00106|IPR002198| GO:PFM GO:0000287|"GO:magnesium ion binding"|PF01648|IPR008278| GO:PFM GO:0008897|"GO:holo-[acyl-carrier-protein] synthase activity"|PF01648|IPR008278| GO:PFM GO:0009059|"GO:macromolecule biosynthetic process"|PF01648|IPR008278| RP:SCP:NREP 1 RP:SCP:REP 36->234|1bdbA|1e-19|18.4|196/267|c.2.1.2| HM:SCP:REP 16->248|1zemA1|5.3e-54|36.4|231/0|c.2.1.2|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 467 OP:NHOMOORG 278 OP:PATTERN ------1----------1------111----------------------------------------- -1--3--1---1--78733-35225533333345554589-117--1--11-2-1--1--2-2-1246441-----------2--1---------------1--12111------------------------1-----11-------1---111-----1-----1--1-------------11------1--1111111111111111-----111-1-----------11-111111-1111111-11-1-----------------1-1-------------------------------------------------------------------11---------1---------------------1--1--211-1-1-212---112-2----------2-11111-2221111-----2131122121-211-----22--------1----1--------------------------------1-2--222-13-2-11-----1111------1-22421--11-2-1--311--2-------------------22--3-1-------------1------22-221--------------------------------1---1------1----1----1-------------------2---1-------------------------------1111--1-----------------1-----------------------------------11-----------------22222---1---121----13---11--------------11--------1-------------------------------------------------------------------------2- ----------1-11--1-1-111--11111111----------1-11---1-----1-1---2-----1-1----1----------------1---1-11-11----12-D-2--1-1------------------1------------------41------22--------1------------111----1----- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 280 STR:RPRED 91.2 SQ:SECSTR ########GGccccTTTTTTcEEEEccTTcHHHHHHHHHHHTcTTccEEEEEEEccGGGTHHHHHHHHEEEEccTTcHHHHHHHHHTcTTccccccEEEEcccccccccGGGccHHHHHHHHHHHTHHHHHHHHHHHHHHHHTcEEEEEEEEGGGTcccTTcHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEccccccTTTTcccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHTTccEEEEcccHccHcHHHHHHHHHHccHHHHHHHHHHcHHHHH###HHH################ DISOP:02AL 1-17, 272-287| PSIPRED cccccccccccccccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHcccEEEEEEccccHHHHHHHHHHHHHHHccccEEEEcccccccccHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEccHHHHcccccccHHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccccccHHHHccccHHHHHHHHHHccHHHcccccHHHHHHHHHHHHcccccEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHccc //