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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC68421.1
DDBJ      :             putative transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  155/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
a.4.5
:173 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   17->123 2f2eB PDBj 2e-13 38.8 %
:RPS:PDB   17->97 2d1hB PDBj 1e-07 13.6 %
:RPS:SCOP  17->105 1z7uA1  a.4.5.69 * 8e-21 35.2 %
:HMM:SCOP  4->147 2f2eA1 a.4.5.69 * 8.2e-29 28.9 %
:RPS:PFM   20->104 PF01638 * HxlR 4e-13 41.7 %
:HMM:PFM   20->105 PF01638 * HxlR 1.8e-19 40.0 85/91  
:HMM:PFM   127->161 PF03150 * CCP_MauG 0.00064 35.3 34/157  
:BLT:SWISS 17->144 Y3122_MYCBO 3e-21 37.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68421.1 GT:GENE BAC68421.1 GT:PRODUCT putative transcriptional regulator GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION complement(865372..865893) GB:FROM 865372 GB:TO 865893 GB:DIRECTION - GB:PRODUCT putative transcriptional regulator GB:NOTE PF01638: Transcriptional regulator GB:PROTEIN_ID BAC68421.1 LENGTH 173 SQ:AASEQ MSDRRSHVTFQHGQEFLAAISERWNYQILREVFFGVGRFGEIKRALGISANILTARLNSLTELGLLTKRAYRSDKPWYEYELTDSARELVVPAIAAITRWAETHATGGDITHHPLMHTVCGNPTNPYLACSSCHQPVEASTLRPVSAEEGGDQGTGGRGAASAAPGDPGSGRR GT:EXON 1|1-173:0| BL:SWS:NREP 1 BL:SWS:REP 17->144|Y3122_MYCBO|3e-21|37.8|127/158| SEG 150->172|ggdqgtggrgaasaapgdpgsgr| BL:PDB:NREP 1 BL:PDB:REP 17->123|2f2eB|2e-13|38.8|103/138| RP:PDB:NREP 1 RP:PDB:REP 17->97|2d1hB|1e-07|13.6|81/96| RP:PFM:NREP 1 RP:PFM:REP 20->104|PF01638|4e-13|41.7|84/91|HxlR| HM:PFM:NREP 2 HM:PFM:REP 20->105|PF01638|1.8e-19|40.0|85/91|HxlR| HM:PFM:REP 127->161|PF03150|0.00064|35.3|34/157|CCP_MauG| RP:SCP:NREP 1 RP:SCP:REP 17->105|1z7uA1|8e-21|35.2|88/108|a.4.5.69| HM:SCP:REP 4->147|2f2eA1|8.2e-29|28.9|142/0|a.4.5.69|1/1|"Winged helix" DNA-binding domain| OP:NHOMO 281 OP:NHOMOORG 157 OP:PATTERN -------------------------------------------------------------------- ----5---------11111-12--2311111222222533-224-1------111---------1-3521-------------------------------------------------------------------------------------------------111--------------------------------------------------------------1--------------------------------------------------------------------1------111-----------1-----------------------------------------------------5331------12-2---1--------------1-111111-1111-3---221223-1--121--1-----1----------11---1-------------------------------11-2--221222212222222221-22222121-3484--222-----3------2----------------1----1-----------------------------------------------------------1-----1---1---------------------------------2-2-------------------------------23311-------------------2---------2--------------------------1-----------------2222211--1--44242211-2-21--1--------------------------1----------------------------------------------------------------------1 --------------------------------------------------------------------------------------------------------------------------------------------------------------1-----------------------------------1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 123 STR:RPRED 71.1 SQ:SECSTR cccGGGGGGGHHHHHHHHTccHHHHHHHHHHHHTccccHHHHHHHHTccHHHHHHHHHHHHHTTcEEEEEcccEEEEEcTTHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHTTcTTTccc################################################## DISOP:02AL 1-8, 148-173| PSIPRED cccccccccccHHHHHHHHHHccHHHHHHHHHHcccccHHHHHHHccccHHHHHHHHHHHHHcccEEEEEEcccccEEEEEEcHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEccccccccHHEEcccccccccHHHEEEcccccccccHHHHHccccccccccccccc //