[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Streptomyces avermitilis MA-4680 (save0)
Gene : BAC68428.1
DDBJ      :             putative fatty acid-CoA racemase
Swiss-Prot:             

Homologs  Archaea  23/68 : Bacteria  346/915 : Eukaryota  150/199 : Viruses  0/175   --->[See Alignment]
c.123.1
:410 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   9->350 2g04A PDBj 8e-26 31.2 %
:RPS:PDB   86->193 2c9eA PDBj 2e-23 12.1 %
:RPS:SCOP  9->400 1xa3A  c.123.1.1 * 1e-83 21.6 %
:HMM:SCOP  3->400 1q7eA_ c.123.1.1 * 5.8e-110 38.7 %
:RPS:PFM   75->207 PF02515 * CoA_transf_3 1e-23 43.9 %
:HMM:PFM   76->264 PF02515 * CoA_transf_3 1.1e-51 38.8 188/191  
:HMM:PFM   24->42 PF04509 * CheC 0.00071 47.4 19/38  
:BLT:SWISS 9->400 CG010_RAT 2e-38 28.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68428.1 GT:GENE BAC68428.1 GT:PRODUCT putative fatty acid-CoA racemase GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION complement(870522..871754) GB:FROM 870522 GB:TO 871754 GB:DIRECTION - GB:PRODUCT putative fatty acid-CoA racemase GB:NOTE PF02515: CoA-transferase family III GB:PROTEIN_ID BAC68428.1 LENGTH 410 SQ:AASEQ MTNESVFTGLKVLDVSSFIAGPAAATVLSDFGADVIKIEPPGRGDPQRRLSSVPPSPRAQANYSWHLANRNKRGMVIDLKSPAATEVLKRLVDWADVVITNFPHGTREKLHLGYEEVAGWNPRVVYADITGFGDAGPDAGQPGFDLTAAWSRSGLLASTRDAGAPPTVPVWGSGDYMSAIAIYAAVVTALYRRERTGQGASVGTSLLAGGVWATGTLVAGALAGGTPFELHDRKAPANPLINPYRTADDEWFMLVASPPHWPGLTRAIGHPELLEDPRFADIEGFVENAAALSELLDAEFRSQPFAHWRDALTRERVTYSLIQTPEEAAQDPQLRANDIVVPLEGVSGLAETISSPVNIRGVPKVPAKRAPDLGEHNDEILAELGFGPAEIAELRAQGAIPGPTEAEGPR GT:EXON 1|1-410:0| BL:SWS:NREP 1 BL:SWS:REP 9->400|CG010_RAT|2e-38|28.8|385/436| SEG 213->226|atgtlvagalaggt| BL:PDB:NREP 1 BL:PDB:REP 9->350|2g04A|8e-26|31.2|308/353| RP:PDB:NREP 1 RP:PDB:REP 86->193|2c9eA|2e-23|12.1|107/317| RP:PFM:NREP 1 RP:PFM:REP 75->207|PF02515|1e-23|43.9|132/189|CoA_transf_3| HM:PFM:NREP 2 HM:PFM:REP 76->264|PF02515|1.1e-51|38.8|188/191|CoA_transf_3| HM:PFM:REP 24->42|PF04509|0.00071|47.4|19/38|CheC| GO:PFM:NREP 2 GO:PFM GO:0003824|"GO:catalytic activity"|PF02515|IPR003673| GO:PFM GO:0008152|"GO:metabolic process"|PF02515|IPR003673| RP:SCP:NREP 1 RP:SCP:REP 9->400|1xa3A|1e-83|21.6|379/400|c.123.1.1| HM:SCP:REP 3->400|1q7eA_|5.8e-110|38.7|393/417|c.123.1.1|1/1|CoA-transferase family III (CaiB/BaiF)| OP:NHOMO 2443 OP:NHOMOORG 519 OP:PATTERN --1----232523322-11321-51--12-32-----------------------------1-2---- --2351-2---1--5TH44-4G--DR444449EDIE5HRi-L2X---2----442221--12B122C5635-111----1616------------------2------12--------------------------66686---32----------------------------------------22---11----------------1--------22323--------1----------------------2------2-1--21--------------------------------------------------------12--2222222-2--3-------1---1----87-1----1--------1--633A-----2-KBB--7B59A633442443442-34A33E39856-41111222133296472759222426722222222511--623------------------------------47F7-5uaHfDDDFIE5577799GE887858T5TRblb1678464798N8H9OT456----11-------1--722-121------------2--2----111111-5---------------------------1---1-4-3--1------1----1-11-1----------------2-3--2222222222-122222222212222222-------11----------------122222221----------------------1111-2212---------------44324242222155553556342455213------------------------------------------111111------------------------------------------------- ----111-----1125444544265573311112225444355222334656B7446123222-1---------1------111-1---35444343111113332-2-23251221-12122223251AU3-633222131222211222115-532723112222232A-122-1------111--83---1-111- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 393 STR:RPRED 95.9 SQ:SECSTR #######TTcEEEEccccTHHHHHHHHHHHTTcEEEEEEcTTcccGGGGccccccGGGcccHHHHcGGGTTcEEEEEEcccccTHHHHHHHHHHHHHHHTTccTTcccHHHHHHHHHHHHcHHHHHHHHHHHHHHHTTccHHHHHHHHHHHHHHHHHHHTTcTTccccHHHHHHHHHHHHHHHHTccHHHHHHHHHccccEEHHHHHTHHHHHHHHHTHHcccTTcTTccccccccccTTEEEEEcTTccEEEEEcccHHHHHHHHHHTTccTTTcccTTcGGGHHHTHHHHHHHHHHHHTTccHHHHHHHTTTcTTcEEEcccHHHHHTcHHHHHTTcEEEccccEEEcEEEcccccccccccccccccccTTTTHHHHHHHTTccHHHHHHHHHHTcc########## DISOP:02AL 1-3, 402-410| PSIPRED ccccccccccEEEHHHHHHHHHHHHHHHHHcccEEEEEccccccccHHHcccccccccccccHHHHHHHcccEEEEEEcccHHHHHHHHHHHHHccEEEEcccHHHHHHHcccHHHHHHHcccEEEEEEEccccccccccccHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEHHHHHHHHHHHHHHHHHHHccccccccccccccccccccEEcccccEEEEEcccHHHHHHHHHcccccccccHHHcccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHccccEEEcccHHHHHcccHHHHccEEEEEEcccccEEEccccccccccccccccccccccccHHHHHHHccccHHHHHHHHHcccEEccccccccc //