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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC68434.1
DDBJ      :             putative dehydrogenase
Swiss-Prot:             

Homologs  Archaea  12/68 : Bacteria  431/915 : Eukaryota  192/199 : Viruses  0/175   --->[See Alignment]
c.2.1
:350 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   54->195 1ae1B PDBj 1e-12 32.1 %
:RPS:PDB   54->243 1a27A PDBj 5e-21 22.5 %
:RPS:SCOP  53->340 1w6uA  c.2.1.2 * 8e-24 16.5 %
:HMM:SCOP  53->301 1jtvA_ c.2.1.2 * 8.1e-42 34.9 %
:RPS:PFM   55->192 PF00106 * adh_short 2e-18 44.9 %
:HMM:PFM   56->193 PF00106 * adh_short 3e-24 29.9 134/167  
:BLT:SWISS 54->254 RDH13_MOUSE 1e-29 39.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68434.1 GT:GENE BAC68434.1 GT:PRODUCT putative dehydrogenase GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION 876545..877597 GB:FROM 876545 GB:TO 877597 GB:DIRECTION + GB:PRODUCT putative dehydrogenase GB:NOTE PF00106: short chain dehydrogenase GB:PROTEIN_ID BAC68434.1 LENGTH 350 SQ:AASEQ MIHRRCVGGRRNHGGRVAQGSSRSRLPQQGTPVTMSSTSSTPPWNVQRLPGADGRVFLVTGGNAGIGYFVAEQLSATGATVVLGSRNPAKAEAATASIRARVPGSRVRAVRLDLADLSSLETAVESLEVERLDAVVHNAGVALDDPPREETGDGHELMFGTNHLGHFALTQWLMPLLSAAPAARVVTMGSFAAKSERLDLDDLQSRKDYQPKRTYGRSKLAQMYFGVELDRRLRAAGSTVASVVVHPGGALDSLTPSRPPVHVRSTGARLSAAPAALLLQGKHAGAWPAVRAVLDPAVRGGQLWGPRVFGLRGEPRREPVWDHLADPSVAARLWDASCDLMGTDLSTISG GT:EXON 1|1-350:0| BL:SWS:NREP 1 BL:SWS:REP 54->254|RDH13_MOUSE|1e-29|39.6|197/334| SEG 31->43|tpvtmsstsstpp| SEG 268->279|arlsaapaalll| BL:PDB:NREP 1 BL:PDB:REP 54->195|1ae1B|1e-12|32.1|140/258| RP:PDB:NREP 1 RP:PDB:REP 54->243|1a27A|5e-21|22.5|178/285| RP:PFM:NREP 1 RP:PFM:REP 55->192|PF00106|2e-18|44.9|136/169|adh_short| HM:PFM:NREP 1 HM:PFM:REP 56->193|PF00106|3e-24|29.9|134/167|adh_short| GO:PFM:NREP 2 GO:PFM GO:0008152|"GO:metabolic process"|PF00106|IPR002198| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00106|IPR002198| RP:SCP:NREP 1 RP:SCP:REP 53->340|1w6uA|8e-24|16.5|261/288|c.2.1.2| HM:SCP:REP 53->301|1jtvA_|8.1e-42|34.9|235/0|c.2.1.2|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 2670 OP:NHOMOORG 635 OP:PATTERN ------------------------32223121--------------21--11---------------- 234-8--1---2--8A744-45114744444487A76274-6-B72-2-23-212--4--432-B-46A4------------2-------11-------1-4--1D-722---------------1---11----221113---2-8224---12112232222--23251132211131221212-----2-------1-1--1-12--111--1--11--211----1-15-111111111111111--------22-----22--11-1---1222---1-1-1--------------1--111111111111---111----12----------2-------------------------1---1----3-2311--1--1413-3--111123----------2-44223334-21-533-4-2784-1-224221-------2111111111332--1-------------------------------32331-1---366372322222243444413548-1-2--223---1--12-11121--1--1---------111-222------------1-1-1------1234---------------------------11---12-2-3-1------------------1----1--------1222122122-111111-211111111121111111122223-111111111111111111411111111-111111111111---1----------213------11-------1111111111--1233222231121----1-11111111----2-------2-11112322---1-------33----------------------------------------1--1------1-1 1-12434-5111552AAL9GBCAKGEC4443345522333323222E7LfKNkdDHE535348362121222534111-1-5554522-7Q4A8K62114263F78-8ILmLUHHN55544485B6184Gi8-76B6234A58A646541635A86588ELCAKDH5F8EL987G45A5*A7699E78LAHHC5J9AE4 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 224 STR:RPRED 64.0 SQ:SECSTR ###########################################HTcccGGGHTcEEEEEcccccHHHHHHHHHHHTcTTccEEEEEEEccGGGTHHHHHTTccTTcEEEEEccTTcHHHHHHHHHTcTTccccEEEEcccccccccGGGccHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTcEEEEEEEEGGGcHHHHHHHHHHHTcccTTcHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEccEEEcccccccHHHHHcEccccc################################################################################### DISOP:02AL 14-49, 348-350| PSIPRED ccccEEEHHHHccccccccccccccEEccccHHHHccccccccccHHHcccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHHccccEEEEEEcccccHHHHHHHHHHHccccccEEEEccccccccccccccHHHHHHHHHHHcHHHHHHHHHHHHHHHHcccccEEEEccHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEccccccccHHHHccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccEEEEccccccccccccccccHHcccHHHHHHHHHHHHHHHccccHHccc //