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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC68452.1
DDBJ      :             putative AraC-family transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  115/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
a.24.16a.4.1
:331 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   211->324 1ti9A PDBj 4e-08 30.3 %
:RPS:PDB   224->326 1bl0A PDBj 3e-15 30.6 %
:RPS:SCOP  216->323 1v4aA1  a.24.16.4 * 2e-11 11.7 %
:HMM:SCOP  273->323 1d5yA2 a.4.1.8 * 1.4e-08 41.7 %
:HMM:PFM   295->323 PF00165 * HTH_AraC 8.5e-09 39.3 28/42  
:HMM:PFM   210->289 PF10335 * DUF294_C 2.5e-05 21.2 80/145  
:BLT:SWISS 212->323 FEAR_ECOLI 1e-09 31.2 %
:PROS 274->319|PS00041|HTH_ARAC_FAMILY_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68452.1 GT:GENE BAC68452.1 GT:PRODUCT putative AraC-family transcriptional regulator GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION 891284..892279 GB:FROM 891284 GB:TO 892279 GB:DIRECTION + GB:PRODUCT putative AraC-family transcriptional regulator GB:NOTE PF00165: Bacterial regulatory helix-turn-helix proteins, araC family GB:PROTEIN_ID BAC68452.1 LENGTH 331 SQ:AASEQ MNGMIGSVFRTADVPADNRFDYWWELIGRTRSSEIISAHAADFWAEYRLMELGPVAVWSASFLPSRYRRSPRMVRQSDPETYHLTLLLDGGLALDHAGRTDTFGPRDLHLADSSRPYDLRSTGDREHHVVKGVAVDFPKALLPLPPHLVRGLLGRGLSGREGLGALLTDFLVGLDRQADTLQPSDAPRLGTVVLDLLSAWLAQVLDAETALSQETRRVATAESIRAFIRQNLHDPELSPPVIAAAHHISLSYLHRIFQQQAQGETVAAYIRSQRLEGACRDLASTSLRTTPIYAVAARWGFLHASDFTRTFRTAYGRSPKEYRLQALYVPE GT:EXON 1|1-331:0| BL:SWS:NREP 1 BL:SWS:REP 212->323|FEAR_ECOLI|1e-09|31.2|109/301| PROS 274->319|PS00041|HTH_ARAC_FAMILY_1|PDOC00040| SEG 81->97|tyhltllldgglaldha| SEG 141->167|llplpphlvrgllgrglsgreglgall| BL:PDB:NREP 1 BL:PDB:REP 211->324|1ti9A|4e-08|30.3|109/129| RP:PDB:NREP 1 RP:PDB:REP 224->326|1bl0A|3e-15|30.6|98/116| HM:PFM:NREP 2 HM:PFM:REP 295->323|PF00165|8.5e-09|39.3|28/42|HTH_AraC| HM:PFM:REP 210->289|PF10335|2.5e-05|21.2|80/145|DUF294_C| RP:SCP:NREP 1 RP:SCP:REP 216->323|1v4aA1|2e-11|11.7|103/151|a.24.16.4| HM:SCP:REP 273->323|1d5yA2|1.4e-08|41.7|48/0|a.4.1.8|1/1|Homeodomain-like| OP:NHOMO 174 OP:NHOMOORG 116 OP:PATTERN -------------------------------------------------------------------- -----1-1--1----------1--1-----------3294---1--------3211--------11-221---------------------------------------------------------------------11--------------------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2--------21243---1----11211222111--------4----21121111112-1-1----1------------------1-----------------------------------11--1----2224221111111121111114141-1-------31--21--1111--1---------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------1---1---------------11111-------111111-2-1211---2------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 125 STR:RPRED 37.8 SQ:SECSTR ########################################################################################################################################################################################################ccHHHHHHTTccHHHHHHHHHHHHHHHHHTTTTccccccHHHHHHccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccH#ccHHHHHHHTTcccHHHHHHHHHHHHcccHHHHHTcc##### DISOP:02AL 1-4, 204-218, 326-331| PSIPRED cccccccccccccccHHHHHHHHHHHHHHHcccccccccccccEEEEEEEEcccEEEEEEEEccEEEEEcHHEEccccccEEEEEEEEEcEEEEEEccEEEEEcccEEEEEcccccEEEEEcccccEEEEEEHHHHHHHHHHHHccHHHHHHccccccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHcccccccHHHHHHHHcccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHccccHHHHHHHHHHHHcccHHHHHHHHccccc //