[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Streptomyces avermitilis MA-4680 (save0)
Gene : BAC68455.1
DDBJ      :             putative IS630 family IS885-like transposase
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  27/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.1
:179 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  7->104 1pdnC  a.4.1.5 * 3e-05 25.5 %
:HMM:SCOP  1->130 1pdnC_ a.4.1.5 * 2.9e-23 32.0 %
:HMM:PFM   31->87 PF01527 * Transposase_8 1.5e-06 28.3 53/76  
:BLT:SWISS 21->149 YIS5_SHISO 2e-10 31.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68455.1 GT:GENE BAC68455.1 GT:PRODUCT putative IS630 family IS885-like transposase GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION complement(893900..894439) GB:FROM 893900 GB:TO 894439 GB:DIRECTION - GB:PRODUCT putative IS630 family IS885-like transposase GB:NOTE IS630 family (894501..893349) Inverted repeat sequence (23/25 bp). Target sequence (TA). GB:PROTEIN_ID BAC68455.1 LENGTH 179 SQ:AASEQ MRYADGGGLTAERRAAREGIRLEAGVRFARGDRTSDIAKDLRVSERSVEQWRRNWREGGIEGLKSKGPAKLPKLSDERFALLEKELAKGPAAHSWEDQRWTLERVRTLIGRQFQVSCSIAGVWRLLHRHGWSWQSPARRALERDEHAVELWKKDVWPQVEVPRRRSGPTSSSRTRPGSR GT:EXON 1|1-179:0| BL:SWS:NREP 1 BL:SWS:REP 21->149|YIS5_SHISO|2e-10|31.0|129/343| SEG 162->178|prrrsgptsssrtrpgs| HM:PFM:NREP 1 HM:PFM:REP 31->87|PF01527|1.5e-06|28.3|53/76|Transposase_8| RP:SCP:NREP 1 RP:SCP:REP 7->104|1pdnC|3e-05|25.5|98/123|a.4.1.5| HM:SCP:REP 1->130|1pdnC_|2.9e-23|32.0|122/0|a.4.1.5|1/1|Homeodomain-like| OP:NHOMO 70 OP:NHOMOORG 28 OP:PATTERN ------------------------------1------------------------------------- ----1------------------------------------137----------------------24------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1111---11111-------1-------------1----------------------5-----------1------------------1----------------------------------3-------------------3------------------------------------------------------------------------------------------------------------------------------------------------1-------------------------------------------------57D-----------1--------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-6, 63-75, 162-179| PSIPRED ccccccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHcccccHHHHHHHHHHccccccccccccccccHHHHHHHHHHHccHHHHHccccccccHHccccccc //