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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC68466.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  8/915 : Eukaryota  15/199 : Viruses  0/175   --->[See Alignment]
c.2.1
:656 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   269->366 2bkoA PDBj 3e-04 10.2 %
:HMM:SCOP  131->284 2fy8A1 c.2.1.9 * 0.00027 19.5 %
:HMM:SCOP  390->541 2fy8A1 c.2.1.9 * 8.5e-08 24.0 %
:RPS:PFM   275->362 PF06241 * DUF1012 2e-07 26.4 %
:HMM:PFM   33->79 PF10823 * DUF2568 0.001 30.4 46/93  
:BLT:SWISS 106->442,504->624 DMI1_ARATH 3e-29 29.2 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68466.1 GT:GENE BAC68466.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION complement(906101..908071) GB:FROM 906101 GB:TO 908071 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:NOTE PF02254: TrkA-N domain GB:PROTEIN_ID BAC68466.1 LENGTH 656 SQ:AASEQ MERSKDRRPVSLQDRARYWFDRTLARSTGTLMGWLVIICLAVVVPVSALLVWTDPGSPRSLSGRLAAVWRSSAETLRLGTVTGTPLRMLLSALLGLVALLCVSTLVGVITTGLAERLAELSRGRSTVLEQGHAVVLGWSDQVSTVVGELVAAQSSYRPRAVVVLAERDKTEMERALAAHVGPAGRTRLVCRSGPASDPGVLALVSPQTASTVLVLPSGEPTADAEVLRVLLALRAVLGEGTGGPPVLAAVLDDRYRAPARLAAGPRGTVLETDTVTARLIAQCVGRPGLSLVLRDLLDFAGDEFHLAEATAFHGGPFGAALLGHATSCVVGLLTAEGRTLLNPPAATLVAPGSRLVVLTRDDGSARPEDCRHLVEPSAIAMAQPPPEDAAHLLLLGWNRRAPLVVNQLRRTARPGSVLDVVTDRAVPGPTREPESGAARLAVRFQSADLSRPETLLGLDLAPYDGLIVLGPEPGDGPDRPDDRTLVTLLALRLLEERTGREMRVITELTDDRNRPLAPVNPGSDVIVSGELTGLLLAQIAQNRHLAPVFDELFSADGSTICLRQAGHYVRTGCETTFATVVAAARDRGECAIGYRRHDRRAIPPDHGIRLNPDKSERREWSADDQVVVVATEPTEPAPAAGQDTEEHQPGPADTRA GT:EXON 1|1-656:0| BL:SWS:NREP 1 BL:SWS:REP 106->442,504->624|DMI1_ARATH|3e-29|29.2|447/824| TM:NTM 3 TM:REGION 29->51| TM:REGION 89->111| TM:REGION 316->338| SEG 40->51|lavvvpvsallv| SEG 86->105|lrmllsallglvallcvstl| SEG 224->240|aevlrvllalravlgeg| SEG 254->267|ryraparlaagprg| SEG 470->503|gpepgdgpdrpddrtlvtllalrlleertgremr| SEG 626->640|vvvvateptepapaa| RP:PDB:NREP 1 RP:PDB:REP 269->366|2bkoA|3e-04|10.2|98/190| RP:PFM:NREP 1 RP:PFM:REP 275->362|PF06241|2e-07|26.4|87/154|DUF1012| HM:PFM:NREP 1 HM:PFM:REP 33->79|PF10823|0.001|30.4|46/93|DUF2568| HM:SCP:REP 131->284|2fy8A1|0.00027|19.5|128/0|c.2.1.9|1/2|NAD(P)-binding Rossmann-fold domains| HM:SCP:REP 390->541|2fy8A1|8.5e-08|24.0|129/0|c.2.1.9|2/2|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 45 OP:NHOMOORG 23 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------1----111-----------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------711--11254-13-1-11-7 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 98 STR:RPRED 14.9 SQ:SECSTR ############################################################################################################################################################################################################################################################################HHHHHHHHHHHHHTTccccHHHHHHHHHcccEEEEEEccTTcTTTTccHHHHTHHHHHccEEEEEEETTEEEEcccTTccccTTcEEEEEEcHHHHHH################################################################################################################################################################################################################################################################################################## DISOP:02AL 1-11, 375-387, 475-478, 640-656| PSIPRED cccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcEEEEEEcccccccHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEccHHHHHHHHHHHcccccccccEEEEEEcccHHHHHHHHHHHcccccccEEEEEEcccccHHHHHHccccccEEEEEEccccccccHHHHHHHHHHHHHHHHcccccEEEEEEccHHHHHHHHHHcccccEEEEccHHHHHHHHHHHccccHHHHHHHHHcccccEEEEccccccccccHHHHHHcccccEEEEEEEcccEEEEccccccEEccccEEEEEEcccccccccccHHHHcccccccccccccccccEEEEEccccHHHHHHHHHHHHccccEEEEEEccccccccccEEEccccEEEEEEEccccHHHHHHHcccccccEEEEEEEccccccccccHHHHHHHHHHHHHHHHHcccEEEEEEEEEcccccEEEcccccEEEEcHHHHHHHHHHHHHcccHHHHHHHHHcccccEEEEEcHHHHHcccccccHHHHHHHHHcccEEEEEEEccccEEEcccccEEEcccccccEEEEccEEEEEEEcccccccccccccccccccccccccc //