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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC68482.1
DDBJ      :             putative GntR-family transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  137/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.5
:135 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   7->110 3eetA PDBj 7e-11 38.0 %
:RPS:PDB   7->120 2di3B PDBj 2e-13 17.5 %
:RPS:SCOP  4->69 1e2xA1  a.4.5.6 * 8e-13 24.2 %
:HMM:SCOP  1->87 1v4rA1 a.4.5.6 * 1.8e-14 36.0 %
:RPS:PFM   14->69 PF00392 * GntR 2e-07 50.0 %
:HMM:PFM   7->69 PF00392 * GntR 5e-19 42.9 63/64  
:HMM:PFM   77->102 PF07638 * Sigma70_ECF 0.00071 34.6 26/185  
:BLT:SWISS 10->92 MOCR_RHIME 7e-11 45.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68482.1 GT:GENE BAC68482.1 GT:PRODUCT putative GntR-family transcriptional regulator GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION complement(922521..922928) GB:FROM 922521 GB:TO 922928 GB:DIRECTION - GB:PRODUCT putative GntR-family transcriptional regulator GB:NOTE PF00392: Bacterial regulatory proteins, gntR family GB:PROTEIN_ID BAC68482.1 LENGTH 135 SQ:AASEQ MPREAPYLALADVLRARILAGEWGIGERLPSRAKLAEKYGVGRNVMQRAMDGLIIEGLLEGRAGSGTYVCMPRERLRMVRSRHRERRGGSPSRAAMKERGRAGAWDSHSQARVPAPEAIPLLALGSSNGVHISPP GT:EXON 1|1-135:0| BL:SWS:NREP 1 BL:SWS:REP 10->92|MOCR_RHIME|7e-11|45.0|80/493| BL:PDB:NREP 1 BL:PDB:REP 7->110|3eetA|7e-11|38.0|100/238| RP:PDB:NREP 1 RP:PDB:REP 7->120|2di3B|2e-13|17.5|114/230| RP:PFM:NREP 1 RP:PFM:REP 14->69|PF00392|2e-07|50.0|56/64|GntR| HM:PFM:NREP 2 HM:PFM:REP 7->69|PF00392|5e-19|42.9|63/64|GntR| HM:PFM:REP 77->102|PF07638|0.00071|34.6|26/185|Sigma70_ECF| GO:PFM:NREP 3 GO:PFM GO:0003700|"GO:transcription factor activity"|PF00392|IPR000524| GO:PFM GO:0005622|"GO:intracellular"|PF00392|IPR000524| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00392|IPR000524| RP:SCP:NREP 1 RP:SCP:REP 4->69|1e2xA1|8e-13|24.2|66/73|a.4.5.6| HM:SCP:REP 1->87|1v4rA1|1.8e-14|36.0|86/0|a.4.5.6|1/1|"Winged helix" DNA-binding domain| OP:NHOMO 172 OP:NHOMOORG 137 OP:PATTERN -------------------------------------------------------------------- --1-----------1------1--11-----11111-233--------1--1--------22--12-4532-----------1---------------------------------------------------------------------------------------------------------------------1------------------------1--11--1--------------------1-1-11-1---1111111111--111111-111111-1111111111--------------11111111-----1---------------111-------------------1-------------1----------------1-2122122223------------1-----11---1--1-----------------------11----------------------------------------111-1111111-----221-------1112-11--------------21--------------------------------------------1------------------------------------11--1---------------------------------------1-----------------------------------22211------------------------------------------------------------------------------------------11-1--1-2111-------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 124 STR:RPRED 91.9 SQ:SECSTR cccccHHHHHHHHHHHHHHHTcccTTcccccHHHHHHHHTccHHHHHHHHHHHHHHTcEEEcTTcTTcccEEEccccccHHHHHHHHHHHcTTccHHHHHHHHHHHHHHHHHTccGGGccTccc########### DISOP:02AL 1-2, 75-88, 131-135| PSIPRED cccccHHHHHHHHHHHHHHccccccccccccHHHHHHHHcccHHHHHHHHHHHHHcccEEEccccEEEEccccHHHHHHHHHHHHHHccccHHHHHHHHcccccHHHHHHHcccccHHHHHHHHccccccEEccc //