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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC68485.1
DDBJ      :             putative TetR-family transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  24/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.121.1a.4.1
:208 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->194 3b6aA PDBj 1e-20 31.9 %
:RPS:PDB   2->205 3b6aB PDBj 7e-18 31.3 %
:RPS:SCOP  2->46 1jt0A1  a.4.1.9 * 2e-08 22.2 %
:RPS:SCOP  60->208 1a6iA2  a.121.1.1 * 2e-12 20.2 %
:HMM:SCOP  2->59 2g7lA1 a.4.1.9 * 1.7e-07 36.2 %
:HMM:SCOP  66->208 2g7lA2 a.121.1.1 * 1.3e-24 35.5 %
:RPS:PFM   61->205 PF02909 * TetR_C 3e-05 29.9 %
:HMM:PFM   61->207 PF02909 * TetR_C 2.5e-21 22.8 136/139  
:HMM:PFM   5->46 PF00440 * TetR_N 5e-13 35.7 42/47  
:BLT:SWISS 2->205 TETR8_PASMU 1e-06 27.9 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68485.1 GT:GENE BAC68485.1 GT:PRODUCT putative TetR-family transcriptional regulator GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION 925541..926167 GB:FROM 925541 GB:TO 926167 GB:DIRECTION + GB:PRODUCT putative TetR-family transcriptional regulator GB:NOTE PF00440: Bacterial regulatory proteins, tetR family GB:PROTEIN_ID BAC68485.1 LENGTH 208 SQ:AASEQ MEQVIDTALGVIATEGYEALTMRRLAGALDTGPASLYAHVVNKADLDELLIGRLCAELVLPEPDPAAWREQIRGVCTQVRDQYLKYPGISRAALAMAPTDLETLRVSEGMLAILLAGGVAPQAAAWAIDALLLYVAAYCLEISIAKQRRVHDEADWVVDTDELQRRLAALPAETFPHTTRYAAELTAGESHDRFDFTLALMIDGLARR GT:EXON 1|1-208:0| BL:SWS:NREP 1 BL:SWS:REP 2->205|TETR8_PASMU|1e-06|27.9|190/207| TM:NTM 1 TM:REGION 124->146| SEG 116->127|aggvapqaaawa| BL:PDB:NREP 1 BL:PDB:REP 2->194|3b6aA|1e-20|31.9|188/213| RP:PDB:NREP 1 RP:PDB:REP 2->205|3b6aB|7e-18|31.3|198/209| RP:PFM:NREP 1 RP:PFM:REP 61->205|PF02909|3e-05|29.9|134/140|TetR_C| HM:PFM:NREP 2 HM:PFM:REP 61->207|PF02909|2.5e-21|22.8|136/139|TetR_C| HM:PFM:REP 5->46|PF00440|5e-13|35.7|42/47|TetR_N| GO:PFM:NREP 2 GO:PFM GO:0016481|"GO:negative regulation of transcription"|PF02909|IPR004111| GO:PFM GO:0016566|"GO:specific transcriptional repressor activity"|PF02909|IPR004111| RP:SCP:NREP 2 RP:SCP:REP 2->46|1jt0A1|2e-08|22.2|45/71|a.4.1.9| RP:SCP:REP 60->208|1a6iA2|2e-12|20.2|119/127|a.121.1.1| HM:SCP:REP 2->59|2g7lA1|1.7e-07|36.2|58/0|a.4.1.9|1/1|Homeodomain-like| HM:SCP:REP 66->208|2g7lA2|1.3e-24|35.5|138/0|a.121.1.1|1/1|Tetracyclin repressor-like, C-terminal domain| OP:NHOMO 37 OP:NHOMOORG 24 OP:PATTERN -------------------------------------------------------------------- ----5--1111---1-----------------1----121-11----------11--2--1-1-2-423--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------------------------------------------------------------------------------------------------------1---------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 207 STR:RPRED 99.5 SQ:SECSTR #HHHHHHHHHHHHHTcGGGccHHHHHHHTTccHHHHHHTTccHHHHHHHHHHHHGGGcccccccTTcHHHHHHHHHHHHHHHHHHcTTHHHHHTTcccccHHHHHHHHHHHHHHHTTTccHTTcccHHHHHHHHHHHHHHHHHHHHHHHHTcccccHHHHHHHHHHHHTccTTTcHHHHHTHHHHHcccHHHHHHHHHHHHHHHHHHH DISOP:02AL 149-150| PSIPRED cHHHHHHHHHHHHHcccccccHHHHHHHHcccccccEEEcccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcccccccHHHHHHHHHcccccHHHHHHHHHHHHHHHccc //