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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC68529.1
DDBJ      :             putative hydrolase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  32/915 : Eukaryota  28/199 : Viruses  0/175   --->[See Alignment]
c.69.1
:407 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   122->274 3f98A PDBj 2e-06 24.2 %
:RPS:PDB   40->389 3d5eB PDBj 6e-04 11.2 %
:RPS:SCOP  241->403 2jbwA1  c.69.1.41 * 2e-04 11.9 %
:HMM:SCOP  86->385 1jfrA_ c.69.1.16 * 4.6e-18 21.7 %
:RPS:PFM   135->344 PF03403 * PAF-AH_p_II 2e-13 40.0 %
:HMM:PFM   121->275 PF03403 * PAF-AH_p_II 7.6e-11 25.8 155/381  
:BLT:SWISS 122->274 PAFA_BOVIN 7e-06 26.5 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68529.1 GT:GENE BAC68529.1 GT:PRODUCT putative hydrolase GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION 970221..971444 GB:FROM 970221 GB:TO 971444 GB:DIRECTION + GB:PRODUCT putative hydrolase GB:NOTE PF03403: Platelet-activating factor acetylhydrolase, plasma/intracellular isoform II GB:PROTEIN_ID BAC68529.1 LENGTH 407 SQ:AASEQ MTTAVALVVTLAVGSGTAASAASSSGPIPSAAHGAVRFDLPEPTGRQAVGTTELHLVDRDRPDPWVADRDRELMVSIWYPARSTSGYSRQPYMQPGAARFVDESGSFGLARPGEVDWAATRTDAASMAPADDRSRRPIVLYSPGLGIPRALGTSTAVELASRGYVVVTVDHTHETTPVEFPDGRVELQKEPMAGAETVKKAVDTRVRDTRFVLDQLAVLRAGRNPDAEERRLPRGLGRALDLDRVGMYGHSAGGVTAAETMRVDRRIDAGIDMDGTLQYNSTEFLPVALEGLDRPFMLMGKASQTHLNKPSWQSFWDRSTSWKRDLSLERGGHFSYTDAQTIVPAVDERLDIPAQTREQFIGTVDPERSTAAQRAYVTAFFDQHLLGRPRHLLDRPSPTHPEVRFVR GT:EXON 1|1-407:0| BL:SWS:NREP 1 BL:SWS:REP 122->274|PAFA_BOVIN|7e-06|26.5|147/444| SEG 2->35|ttavalvvtlavgsgtaasaasssgpipsaahga| SEG 165->179|vvvtvdhthettpve| BL:PDB:NREP 1 BL:PDB:REP 122->274|3f98A|2e-06|24.2|153/377| RP:PDB:NREP 1 RP:PDB:REP 40->389|3d5eB|6e-04|11.2|331/370| RP:PFM:NREP 1 RP:PFM:REP 135->344|PF03403|2e-13|40.0|165/216|PAF-AH_p_II| HM:PFM:NREP 1 HM:PFM:REP 121->275|PF03403|7.6e-11|25.8|155/381|PAF-AH_p_II| GO:PFM:NREP 2 GO:PFM GO:0003847|"GO:1-alkyl-2-acetylglycerophosphocholine esterase activity"|PF03403|IPR005065| GO:PFM GO:0016042|"GO:lipid catabolic process"|PF03403|IPR005065| RP:SCP:NREP 1 RP:SCP:REP 241->403|2jbwA1|2e-04|11.9|159/359|c.69.1.41| HM:SCP:REP 86->385|1jfrA_|4.6e-18|21.7|221/260|c.69.1.16|1/1|alpha/beta-Hydrolases| OP:NHOMO 80 OP:NHOMOORG 60 OP:PATTERN -------------------------------------------------------------------- ----3--------------------1----------3----1-------------------------221----------------------------------------------------------------------------------------------------------------------------1111121--11111111----11----1------------------------------------------------------------------------------------------------------------------1-2---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1111-------------------------------------------------------------------------------------------------------------- ---------------1-31-1111111------2-1----------211122231112--------------------------------------------------------------------------------------------------------------------------11---1---2--------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 331 STR:RPRED 81.3 SQ:SECSTR #######################################ccccccccEEEEEEEEEcccTT##########cEEEEEEEEEccccccccccHHHHHHHHHHHTccHHHHHHHHHHHTT#cEEccEETccccccccEEEEEEEccTTccTTTTHHHHHHHHHTTcEEEEEccccccccEEEEcccHHHHHHTccEEEEcccccGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccGGGGTTcEEEEEEEEEHHHHHHHHHHHcTTccEEEEEccccTTccGGGGGcccccEEEEEETTTccHHHHHHHHHTccTTccEEEEEETTccGGGGGGGGcccHHHHHHTTcc########ccccHHHHHHHHHHHHHHHHHHHHTccc################## DISOP:02AL 1-2, 22-38, 401-402| PSIPRED ccHHHEEHHHHHHcccccHHHHHHccccccccccccccccccccccccccEEEEEEcccccccccccccccEEEEEEEEEcccccccccccEEcccHHHHHHHHcccccccHHHEEEcEEEEcccccccccccccEEEEEEEccccccHHHHHHHHHHHHHccEEEEEEEccccccccccccccHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHcccccccEEEEEEcHHHHHHHHHHHccccEEEEEEEccccccccccccccccccccccEEEEccccccccccHHHHHHHHcccccEEEEEEcccccccccccHHccHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccEEEEEc //