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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC68532.1
DDBJ      :             putative IS200/IS605 family ISMma22-like transposase
Swiss-Prot:             

Homologs  Archaea  22/68 : Bacteria  182/915 : Eukaryota  0/199 : Viruses  1/175   --->[See Alignment]
g.72.1
:404 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   101->214 3ee7B PDBj 1e-14 12.1 %
:RPS:SCOP  335->385 1wj0A  g.72.1.1 * 2e-11 9.8 %
:RPS:PFM   1->46 PF12323 * HTH_14 6e-05 43.5 %
:RPS:PFM   75->289 PF01385 * Transposase_2 2e-30 41.1 %
:RPS:PFM   325->394 PF07282 * Transposase_35 3e-12 47.1 %
:HMM:PFM   77->290 PF01385 * Transposase_2 1.3e-31 25.5 200/227  
:HMM:PFM   325->393 PF07282 * Transposase_35 4.9e-24 38.2 68/69  
:HMM:PFM   1->42 PF12323 * HTH_14 2.4e-10 40.5 42/46  
:BLT:SWISS 135->395 YDCM_ECOLI 3e-32 35.9 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68532.1 GT:GENE BAC68532.1 GT:PRODUCT putative IS200/IS605 family ISMma22-like transposase GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION 972680..973894 GB:FROM 972680 GB:TO 973894 GB:DIRECTION + GB:PRODUCT putative IS200/IS605 family ISMma22-like transposase GB:NOTE IS200/IS605 family GB:PROTEIN_ID BAC68532.1 LENGTH 404 SQ:AASEQ MIRAYKFLLRPTVRQAQALAEMLRDHCSLYNAALQERRDAWRHPSKTTVKYGGQSAQLKDIRAFDPERQGRWSFSSQQATLRRLDKAFAAFFRRVKSGETPGYPRFRGVNWFDTVDFPKDGDGCRWNSTPHDPATRVRLQGVGHVKVNQHRPVAGRVKTVSVKREGRKWFVVLTAEQDQPEPLPATGSAAGIDLGIANFLADSGGGFVPNPRHGRRAADKLQAAQQALARFPRRKAKDRTANHRRAVGKVAQLHGKVRRQRLDHAHKTALGLVRAHDFIAHEDLRIRNMSKAPAPKPDPDKPGTFLPNGAAAKAGLNKSINDAGWGVFLTILHAKAESAGREVIAVDPRDTSRTCPECGHTAKENRPTQEKFHCVACGHHAHADTVAATNVLRAGLVRRNANPA GT:EXON 1|1-404:0| BL:SWS:NREP 1 BL:SWS:REP 135->395|YDCM_ECOLI|3e-32|35.9|248/402| SEG 215->230|rraadklqaaqqalar| SEG 291->302|kapapkpdpdkp| RP:PDB:NREP 1 RP:PDB:REP 101->214|3ee7B|1e-14|12.1|107/115| RP:PFM:NREP 3 RP:PFM:REP 1->46|PF12323|6e-05|43.5|46/46|HTH_14| RP:PFM:REP 75->289|PF01385|2e-30|41.1|192/207|Transposase_2| RP:PFM:REP 325->394|PF07282|3e-12|47.1|70/70|Transposase_35| HM:PFM:NREP 3 HM:PFM:REP 77->290|PF01385|1.3e-31|25.5|200/227|Transposase_2| HM:PFM:REP 325->393|PF07282|4.9e-24|38.2|68/69|Transposase_35| HM:PFM:REP 1->42|PF12323|2.4e-10|40.5|42/46|HTH_14| RP:SCP:NREP 1 RP:SCP:REP 335->385|1wj0A|2e-11|9.8|51/58|g.72.1.1| OP:NHOMO 860 OP:NHOMOORG 205 OP:PATTERN ------1-7114--3---------2111324A-1---2----------235F4-----1--------- ---------------------1----------2---2-55--7L----------------------932-3----5-----------1--------------------2---------------------------C-12----4-23S4MF*EF11------21X29K13-------------78-----12-11111-3A3112-431-----112Z2---D3------4----------------------1-----9-G1--55---2---------------------------------------------------23---------1-3--811-2-H-3--3---1211A1---1-----1--6-----------------------------------------3-2--------------------------------111111112-----------------------------------------------B66-3B-------1-------1-----------------91----------------------2----1--------------------------------------3-2-51----------2-----2----31--------3------------2D-------------3--12221-1-32-22142113132-3111111-------D---1---1---1111131111233------------------------------1----------1--54---------135------------------------------------------------------3--------------1----------------------------------42-3-3124-- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 107 STR:RPRED 26.5 SQ:SECSTR ####################################################################################################EEEEEEEEcc##TTTcccEEE####EEEEEccccccEEEEEEEcccccEEEEcTTcccEEEEEccccEEEEEccTTccEEEEEEEcTTccHHHHHHHHHHHHcccc#ccccccc############################################################################################################################################################################################## DISOP:02AL 232-244, 400-404| PSIPRED ccEEEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEccccEEEEEEEcccEEEEEEEEEEcccEEEEcccccEEEEEEEEcccEEEEEEEEEcccEEEEEEEEEccccccccccccEEEEEEcccEEEEEEcccEEcccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEccccHHHHHHcccccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccEEEEEccccccccccccccccccccccccEEEEcccccEEccHHHHHHHHHHHHHHHcccccc //