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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC68538.1
DDBJ      :             putative rhamnosidase
Swiss-Prot:             

Homologs  Archaea  8/68 : Bacteria  54/915 : Eukaryota  27/199 : Viruses  0/175   --->[See Alignment]
a.102.1b.1.2b.18.1
:1030 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   138->259 2okxA PDBj 1e-04 29.1 %
:BLT:PDB   306->508 2okxA PDBj 9e-10 33.0 %
:RPS:PDB   88->236 3dyoA PDBj 1e-10 15.3 %
:RPS:PDB   326->997 3cihA PDBj 2e-47 14.0 %
:RPS:SCOP  48->233 1bglA3  b.18.1.5 * 1e-14 14.1 %
:RPS:SCOP  306->420 1tg7A2  b.18.1.27 * 3e-07 11.8 %
:RPS:SCOP  676->805 1vd5A  a.102.1.7 * 4e-06 17.7 %
:HMM:SCOP  6->110 1egjA_ b.1.2.1 * 0.00027 28.4 %
:HMM:SCOP  143->229 1yq2A3 b.18.1.5 * 3.8e-06 30.9 %
:HMM:SCOP  599->995 1v7wA1 a.102.1.4 * 1e-42 25.5 %
:RPS:PFM   158->232 PF02837 * Glyco_hydro_2_N 4e-04 37.7 %
:RPS:PFM   316->458 PF08531 * Bac_rhamnosid_N 5e-41 56.6 %
:RPS:PFM   496->992 PF05592 * Bac_rhamnosid e-111 48.3 %
:HMM:PFM   492->994 PF05592 * Bac_rhamnosid 8.5e-197 50.2 498/509  
:HMM:PFM   169->258 PF08531 * Bac_rhamnosid_N 2.3e-06 26.7 90/172  
:HMM:PFM   314->483 PF08531 * Bac_rhamnosid_N 1.8e-66 57.1 168/172  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68538.1 GT:GENE BAC68538.1 GT:PRODUCT putative rhamnosidase GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION complement(979582..982674) GB:FROM 979582 GB:TO 982674 GB:DIRECTION - GB:PRODUCT putative rhamnosidase GB:NOTE PF05592: Bacterial alpha-L-rhamnosidase GB:PROTEIN_ID BAC68538.1 LENGTH 1030 SQ:AASEQ MSALRVTSPSVEYVQRPLGLDAAHPRLSWPMASAAPGRRQSAYQVRVASSAAGLSHPDVWDSGKVVSDDSVLVPYAGPPLKPRTRYFWSVRVWDADGGASEWSAPSWWETGLMGASQWSAKWISAPAPLTEAPSLEGSSWIWFPEGEPANSAPAATRWFRRTVDLPDDITGATLAISADNVYAVSVDGAEVARTDLEADNEGWRRPAVIDVLDHVHSGNNTLAVSASNASVGPAGWICVLVLTTASGEKKIFSDASWKSTDHEPADGWREPDFDDSGWPAAKVAAAWGAGPWGRVAPVASAANQLRHEFRLPHKKVSRARLYATALGLYEAHLNGRRVGRDQLAPGWTDYRKRVQYQTYDVTSSVRPGANALAAYVAPGWYAGNVGMFGPHQYGERPALLAQLEVEYADGTSERITSGPDWRAASGPIVSADLLSGETYDARKETAGWTSPGFDDRAWLAVRGADNDVPEQIVAQVDGPVRIAKELPARKVTEPKPGVFVLDLGQNMVGSVRLRVSGDAGTTVRLRHAEVLNPDGTIYTANLRSAAATDTYTLKGQGEETYEPRFTFHGFRYVEVTGFPGKPSTTSVTGRVMHTSAPFTFEFETNVPMLNKLHSNITWGQRGNFLSVPTDTPARDERLGWTGDINVFAPTAAYTMESARFLTKWLVDLRDAQTSDGAFTDVAPAVGNLGNGVAGWGDAGVTVPWALYQAYGDRQVLADALPSVHAWLRYLEKHSDGLLRPADGYGDWLNVSDETPKDVIATAYFAHSADLAARMATELGKDAAPYTDLFTRIRKAFQTAYVASDGKVKGDTQSAYVLTLSMNLVPDALRKAAADRLVALIEAKDWHLSTGFLGTPRLLPVLTDTGHTDVAYRLLHQRTFPSWGYPIDKGSTTMWERWDSIQPDGGFQTPEMNSFNHYAYGSVGEWMYANIAGIAPGRAGYRQVVIRPRPGGEVTSARATFASLHGPVSTRWQQRSGGFVLTCSVPPNTTAEVWIPADHPDRVQHTHGTFVRAEDGCAVFEVGSGSHRFTV GT:EXON 1|1-1030:0| SEG 277->297|gwpaakvaaawgagpwgrvap| BL:PDB:NREP 2 BL:PDB:REP 138->259|2okxA|1e-04|29.1|112/954| BL:PDB:REP 306->508|2okxA|9e-10|33.0|188/954| RP:PDB:NREP 2 RP:PDB:REP 88->236|3dyoA|1e-10|15.3|137/1011| RP:PDB:REP 326->997|3cihA|2e-47|14.0|630/690| RP:PFM:NREP 3 RP:PFM:REP 158->232|PF02837|4e-04|37.7|69/155|Glyco_hydro_2_N| RP:PFM:REP 316->458|PF08531|5e-41|56.6|143/164|Bac_rhamnosid_N| RP:PFM:REP 496->992|PF05592|e-111|48.3|489/503|Bac_rhamnosid| HM:PFM:NREP 3 HM:PFM:REP 492->994|PF05592|8.5e-197|50.2|498/509|Bac_rhamnosid| HM:PFM:REP 169->258|PF08531|2.3e-06|26.7|90/172|Bac_rhamnosid_N| HM:PFM:REP 314->483|PF08531|1.8e-66|57.1|168/172|Bac_rhamnosid_N| GO:PFM:NREP 2 GO:PFM GO:0004553|"GO:hydrolase activity, hydrolyzing O-glycosyl compounds"|PF02837|IPR006104| GO:PFM GO:0005975|"GO:carbohydrate metabolic process"|PF02837|IPR006104| RP:SCP:NREP 3 RP:SCP:REP 48->233|1bglA3|1e-14|14.1|177/217|b.18.1.5| RP:SCP:REP 306->420|1tg7A2|3e-07|11.8|110/182|b.18.1.27| RP:SCP:REP 676->805|1vd5A|4e-06|17.7|124/381|a.102.1.7| HM:SCP:REP 6->110|1egjA_|0.00027|28.4|95/0|b.1.2.1|1/1|Fibronectin type III| HM:SCP:REP 143->229|1yq2A3|3.8e-06|30.9|81/0|b.18.1.5|1/2|Galactose-binding domain-like| HM:SCP:REP 599->995|1v7wA1|1e-42|25.5|380/0|a.102.1.4|1/1|Six-hairpin glycosidases| OP:NHOMO 175 OP:NHOMOORG 89 OP:PATTERN --------111111---1-----------1-------------------------------------- 1-1-1-------------------------------1-1----2312--1---33---------1--12-------------------2252-3-------2--25---4---------------------------1111-------------------------------------------1---1-----------11-11---1------11---------------3---------------------1-------------11---------------------------------------------------------------------------------------------------2-----2-11-------------------------------------------1---1--111----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-----------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-1- ------5--------2-3-422-6251-------------------1--1358A541------1--------------------------------112---------1----------------------------------------------------------------------------1---2---3----- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 933 STR:RPRED 90.6 SQ:SECSTR #########################################ccccccccGGGGGcTTGGGGccTTEEccEEEEEEEEEcGGGccTTTEEEEEEccGGGcEcHHHHHcccTTcEEEEEcccGGGGcEEETccccEEEccccccccccTTcccccccEEEEEEEEEEcHHHHHccEEEcEEcEEEEEETTEEEEEEEccc##EcTTccEEEEcTTTcccEEEEEEEEEEcccGGGGGcccEE###EETTEEEEEccTTcEE##############################################EEEEEEcHHHHHccEEEEEETTHHHHHHHHHHTTcEETTEEccccccEEEEEEEEEcccEEEEEEEEcEEEEEEEETTEEcEEccccEEEEccEEEEEEEEEEccccccEEEEEcccccccTTcEEEccccccccTTccccccTTcccEcEEcEcTTcccEEccccTTccGGGcccEcEEEcccEEEEcTTccEEEEEEEEEEEEEEEEEEEHEcEEEEEEEEccHHTcccEEEEEEETTEEEETTTTEEEEccccccEEEcEEEEEEEEEEcccTTEEEEEEEEEEEcccccccEEEEccHHHHHHHHHHHHHHHTccccccccHHccccccccHHHHHHHHHHHTTTccHHHHHHHHHHHHccccccccEEcTTcccccccccccGGGcHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHTTccTTccccTTccccccccTTccccccEEHHHHHHHHHHHHHHHHHHHHTcHHHHHHHHHHHHHHHHHHHHEETcEEETTEEcccccHHHHHHHHTTcccHHHHHHHHHHTTTcTTccccccHHHHHHHHHHHHTTcHHHHHHHHHHHHHHTTTHHHTTcccccccccccGGGGGcTTcTTccccccGGGcTHHHHHHHHTccEEEEEGGGTEEEEccccTTccEEEEEEETEEccEEEEEEcccEEEEEEEcccccEEcccEEEEETcGGGEEccccEEEEcTTccEEEcccTTE##### DISOP:02AL 1-2, 473-479, 482-483, 1000-1008| PSIPRED cccEEEEEEEEEEEEccccccccccEEEEEEcccccccEEEEEEEEEEccHHHccccccccccEEccccEEEEEcccccccccEEEEEEEEEEcccccccccccccEEEEEEccccccccEEcccccccccccccccccEEEccccccccccccccEEEEEEEEccccccEEEEEEEEccEEEEEEccEEEEccccccccccccccEEEcccHHHccccEEEEEEEEccEEcccccEEEEEEEEcccEEEEEEEcccccccccccccccccccccccccccEEEEcccccccccccccccccccEEEEEEEcccccEEEEEEEEEccEEEEEEccEEEccccccccccccccEEEEEEEEccccEEccccEEEEEEcccEEccccccccccccccccEEEEEEEEEEccccEEEEEEcccEEEEcccEEEcccccccEEEcccccccccccccccccccEEEEcccccccccccccccccEEEEEEEEEEEEEccccEEEEEccccEEEEEEEEEEcccccEEEEEEEEEEccccccccccccccccEEEEEEccccEEEEEEEEEEcEEEEEEEEEEccccccEEEEEEEEEccccccEEEEccHHHHHHHHHHHHHHHHccccEEEcccccHHHHcccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccccccEEccccccccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccccccccccEEEEcccccccccccEEEEHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccccEEcccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHccccccHHHHcccEEEEEEEcccccccccccccccccccHHHHHHHHHHHccEEEEEEcccccEEEEEEEEccccccEEEEEEEcccEEEEEEEEEEccEEEEEEEEccccEEEEEEEccccccEEcccEEEEEEcccEEEEEEcccEEEEEc //