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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC68541.1
DDBJ      :             putative LacI-family transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  566/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
a.35.1c.93.1
:348 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   11->336 1zvvA PDBj 9e-31 30.8 %
:RPS:PDB   8->347 1efaA PDBj 7e-56 26.9 %
:RPS:SCOP  11->64 1bdhA1  a.35.1.5 * 6e-12 35.2 %
:RPS:SCOP  70->347 1rzrA2  c.93.1.1 * 1e-47 26.3 %
:HMM:SCOP  8->66 1efaA1 a.35.1.5 * 5.3e-19 57.6 %
:HMM:SCOP  68->349 1dbqA_ c.93.1.1 * 3.6e-59 40.1 %
:RPS:PFM   11->56 PF00356 * LacI 2e-05 50.0 %
:RPS:PFM   67->317 PF00532 * Peripla_BP_1 2e-34 43.9 %
:HMM:PFM   69->326 PF00532 * Peripla_BP_1 2.2e-25 26.2 240/279  
:HMM:PFM   11->56 PF00356 * LacI 5e-21 58.7 46/46  
:BLT:SWISS 8->347 CELR_THEFU 1e-82 50.8 %
:PROS 12->30|PS00356|HTH_LACI_1
:PROS 138->150|PS00398|RECOMBINASES_2
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68541.1 GT:GENE BAC68541.1 GT:PRODUCT putative LacI-family transcriptional regulator GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION complement(983914..984960) GB:FROM 983914 GB:TO 984960 GB:DIRECTION - GB:PRODUCT putative LacI-family transcriptional regulator GB:NOTE PF00532: Periplasmic binding proteins and sugar binding domain of the LacI family GB:PROTEIN_ID BAC68541.1 LENGTH 348 SQ:AASEQ MTGRSQGQRPTLEDVARQSGVSRSTVSRLINGSPRVSPAVAERVRTAVAELGYVPNQAARSLVTRRNDAIAVVVTEPQNRLFVDPFFDRHLRGIRQELVRQGAQLVLLLIEEPDDYPRVGNFLGGGHVDGALLFSLRGDDPLPEMVDRMGLPAVFGGRPVLSPEDRGHRYTYVDADNRGGAREAVRHLVAQGRERIATITGPLNQAAAVDRLDGYRDVLPDSAPDLIVEGDFTLRGGVDAMAELLARCPDLDAVFAASDLMACGALRVLKEHGRRVPEDVAVIGFDDLPPLVETTEPSLTTVHQDIEGMGRLMARLLFERIPATPLDDGDHSLHRVITPTRLILRKTA GT:EXON 1|1-348:0| BL:SWS:NREP 1 BL:SWS:REP 8->347|CELR_THEFU|1e-82|50.8|331/340| PROS 12->30|PS00356|HTH_LACI_1|PDOC00366| PROS 138->150|PS00398|RECOMBINASES_2|PDOC00334| SEG 39->50|avaervrtavae| BL:PDB:NREP 1 BL:PDB:REP 11->336|1zvvA|9e-31|30.8|312/332| RP:PDB:NREP 1 RP:PDB:REP 8->347|1efaA|7e-56|26.9|323/328| RP:PFM:NREP 2 RP:PFM:REP 11->56|PF00356|2e-05|50.0|46/46|LacI| RP:PFM:REP 67->317|PF00532|2e-34|43.9|239/261|Peripla_BP_1| HM:PFM:NREP 2 HM:PFM:REP 69->326|PF00532|2.2e-25|26.2|240/279|Peripla_BP_1| HM:PFM:REP 11->56|PF00356|5e-21|58.7|46/46|LacI| GO:PFM:NREP 3 GO:PFM GO:0003700|"GO:transcription factor activity"|PF00356|IPR000843| GO:PFM GO:0005622|"GO:intracellular"|PF00356|IPR000843| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00356|IPR000843| RP:SCP:NREP 2 RP:SCP:REP 11->64|1bdhA1|6e-12|35.2|54/56|a.35.1.5| RP:SCP:REP 70->347|1rzrA2|1e-47|26.3|262/272|c.93.1.1| HM:SCP:REP 8->66|1efaA1|5.3e-19|57.6|59/59|a.35.1.5|1/1|lambda repressor-like DNA-binding domains| HM:SCP:REP 68->349|1dbqA_|3.6e-59|40.1|267/282|c.93.1.1|1/1|Periplasmic binding protein-like I| OP:NHOMO 4118 OP:NHOMOORG 569 OP:PATTERN -------------------------------------------------------------------- 8783p125669111-1111-11---E11111-2---24AG6-2DLcN1FHD3QOR-16--8678S6NOUG69888ADC2---4-----1111-1-----1-7-319-749--------------------------78865---C----------------------1-1-------------56-22DC-C7AAAA9A87B7A99878EDBB889A868C27576889983S53333333333333331243857-7718212886555634864444555655543365565456665443344444444456633366658415C222222272744114779F4421317--------H1-488892--1-1FBB3-----2-433--------44343444348---3--3135D--MFFBRMNYWULI669156C75545533--------34411---------------------------------38271144148ABCB86333377CI5454379893644--555A-41144826E----1--1----------------1----1--3------------------G-----------------------------A9C6-87-84A5565733233412233115-------------IIHF7IDBCCBBCBCCA-BB9CDBACCDBCBDD9CDAKNJGG556BC9ACABBBBAABA9AO98AAAAB4-FDEEEEEBDEFE---------------86C333436133333334------1---674444244713334-544----------A9A9AAAAADB9FF87A9A998881111--------------------5-------------------------476713B545-1- -------------1------------------------------------------------------------------------------------------------------------------------------------------------1-----------------------------------4---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 348 STR:RPRED 100.0 SQ:SECSTR cccTTcTccccHHHHHHTTTccHHHHHHHHTTcccccTHHHHHHHHHHHHHTccccHHHHHHTTccccEEEEEEccTTcTccccHHHHHHHHHHHHHHHHTTcEEEEEEcccHHHHHHHHHHHHHTTccEEEEEccccHHHHHHHHHHcccccEEEccccTTcccTTccccEEEEcHHHHHHHHHHHHHHTTcccEEEEEccTTcHHHHHHHHHHHHHHHTTcccEEEEccccHHHHHHHHHHHHHTTccccEEEEccHHHHHHHHHHHHTTTcccTTTcEEEEEEccGGGGGGccccccEEEccHHHHHHHHHHHHHHHHcTTccHTTcccccEEEEccEEEccccc DISOP:02AL 1-12, 59-66, 347-348| PSIPRED cccccccccccHHHHHHHHcccHHHHHHHccccccccHHHHHHHHHHHHHHcccccHHHHHHHcccccEEEEEEEcccccccccHHHHHHHHHHHHHHHHcccEEEEEEcccHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHccccEEEEcccccccccccccccEEEEcHHHHHHHHHHHHHHccccEEEEEEcccccHHHHHHHHHHHHHHHHccccEEEEccccHHHHHHHHHHHHHccccccEEEEEcHHHHHHHHHHHHHccccccccEEEEEEccHHHHHHHHcccEEEEEccHHHHHHHHHHHHHHHHHcccccccccccEEEEEccEEEEEccc //