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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC68584.1
DDBJ      :             putative solute-binding dependent transport lipoprotein
Swiss-Prot:             

Homologs  Archaea  3/68 : Bacteria  160/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.94.1
:595 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   79->476 2grvC PDBj 3e-25 29.7 %
:RPS:PDB   77->586 3dp8B PDBj 8e-58 16.9 %
:RPS:SCOP  73->593 1xocA1  c.94.1.1 * 7e-58 17.4 %
:HMM:SCOP  71->591 1vr5A1 c.94.1.1 * 2.6e-77 28.8 %
:RPS:PFM   117->512 PF00496 * SBP_bac_5 2e-25 31.0 %
:HMM:PFM   128->514 PF00496 * SBP_bac_5 6.4e-65 23.6 360/372  
:BLT:SWISS 43->577 Y1311_MYCBO 2e-46 28.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68584.1 GT:GENE BAC68584.1 GT:PRODUCT putative solute-binding dependent transport lipoprotein GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION 1045629..1047416 GB:FROM 1045629 GB:TO 1047416 GB:DIRECTION + GB:PRODUCT putative solute-binding dependent transport lipoprotein GB:NOTE PF00497: Bacterial extracellular solute-binding proteins, family 3 GB:PROTEIN_ID BAC68584.1 LENGTH 595 SQ:AASEQ MFSAGGCTYLAVNTHTIATVTRGDDLAVGYASAMLGAVHGLVGDELGAYSGAEHQPSEGITVELNDSNRTAVKPGGTYVHAVGNTPPNWNLLSAVGNVVETGMVLQLITPSPYVAFPDLQNHWNEDLLASEPELVATDPQTIVYRLRPEACWNDGTPVGVEDFRYTWRVSSGHHSPACLPSTHAGYELIESVEGDHDGRTVVVTLAPGKAFPDWDAMFSYLYPAHIAARAGDLGTADGLAAAFASFDQVVPTWSAGPYQVEHIEPGVEVVLVANPNWYGRVVPSLDRVVFRVVSDPVALVDAVRHRVVHGMSTPHPTKALVDAFRDMPGVRYELSQGLIWEHLDLNTRNPFLADAGLRRAILTAVDRDEILAETVGTFHPDVKPSNSHNFYLGQPAYRDVITGTGQGSGDIAAAERLLHAAGYTIRDGRLRTPDGSAVAVLRFRHAPGDVMRRRTGELVRDQLRHIGLEVRIEPTDRPGTMVAGDYDIVAFNWIGSPLRVGPARDMWTTGGGMNFGHFSHAEVDRLIGEANETLDLVKAHELLNRADEVLSHEAYSLPLCQKPSLLVVDDRFANVRANPTNGLVIYNAQEWGLRA GT:EXON 1|1-595:0| BL:SWS:NREP 1 BL:SWS:REP 43->577|Y1311_MYCBO|2e-46|28.8|511/591| SEG 227->244|aaragdlgtadglaaafa| BL:PDB:NREP 1 BL:PDB:REP 79->476|2grvC|3e-25|29.7|370/511| RP:PDB:NREP 1 RP:PDB:REP 77->586|3dp8B|8e-58|16.9|480/497| RP:PFM:NREP 1 RP:PFM:REP 117->512|PF00496|2e-25|31.0|352/366|SBP_bac_5| HM:PFM:NREP 1 HM:PFM:REP 128->514|PF00496|6.4e-65|23.6|360/372|SBP_bac_5| GO:PFM:NREP 2 GO:PFM GO:0005215|"GO:transporter activity"|PF00496|IPR000914| GO:PFM GO:0006810|"GO:transport"|PF00496|IPR000914| RP:SCP:NREP 1 RP:SCP:REP 73->593|1xocA1|7e-58|17.4|493/504|c.94.1.1| HM:SCP:REP 71->591|1vr5A1|2.6e-77|28.8|490/0|c.94.1.1|1/1|Periplasmic binding protein-like II| OP:NHOMO 234 OP:NHOMOORG 163 OP:PATTERN ---------------------------------------------------1----1-1--------- -1--4221---11112222-222223222222222231321----12-1211122122-----12214122----2------1-----------------------------------------------------11112---11--------------------------------------1--------------11-111-111-111--1-2---2---------51--------------------------------------------------------------------------------1----------21---------1-1----------1--3-----1-----1---12--1--1----------1-113----1-1-11-1111---1--------221--12211212211111--------------------------111-----------------------------------1--11-----------------------31------------------3----------------------1--------111111111111111------1------------------------1----1----------------------------------1--------1--------------------------------------------------------------------1------------------------------------------------------------1------1----------------------------------------------3--11--------------------------------------------1------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 522 STR:RPRED 87.7 SQ:SECSTR ##################################################################ccccccccccEEEEEEccccccccTTccTTcHHHcHHHHHHHccccEEEcTTccEEcEEEccEEEEEEEcTTccEEEEEEccccccTTcccccHHHHHHHHHHHHTTGGGcccGTTcHHHHHEEEEEEcccccEEEEEEccccccTTHHHHHTcccccccccGGGcccccGGGTTTcTcTTccccccccccEEEEEEETTTEEEEEEcTTcccccGccccEEEEEEcccHHHHHHHHHTTcccEEEEETTccHHHHHHHTcTTcEEEEccccEEEEEEEcTTcTTTTcHHHHHHHHHHccHHHHHHHTTccTcccccccccccccTTcTTcccTcTccccccccHHHHHHHHHHTTccccTTccccEETTEEcEEEEEEETTcHHHHHHHHHHHHHHHTTTcEEEEEEEcHHHHHHHTcccEEEEEcccTTTTTHHHHHGGGcHHHHTTTcTTHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHTTcEEEEEEEcEEEEEcGGGccccccccTTcccGHc####### DISOP:02AL 1-4, 56-72| PSIPRED ccccccEEEEEEEcEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccEEEEEEcccccccccccccccHHHHHHHHHHHccccccEEccccccccccccccccEEEccccEEEEEEEccccEEcccccccHHHHHHHHHHHHccccccccHHHHHHHHHHHHEEEccccEEEEEEEcccccHHHHHHHHHHHcHHHHHHHccccccHHHHccccccccccccccccccEEEEEEEcccEEEEEEccccccccccEEEEEEEEEEccHHHHHHHHHcccEEEEEcccccHHHHHHHHccccEEEEEEcccEEEEEEEEccccccccHHHHHHHHHHccHHHHHHHHHHccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccccEEcccccEEEEEEEEEccccccHHHHHHHHHHHHHHcccEEEEEEccHHHHHHcccccEEEEEcccccccHHHHHHHHcccccccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccEEEEEEEcEEEEEEcccccEEEccccccccccEEEEcccc //