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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC68592.1
DDBJ      :             putative TetR-family transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  15/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.121.1a.4.1
:252 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   23->89 3bniB PDBj 5e-07 32.8 %
:RPS:PDB   21->200 3b81A PDBj 2e-13 13.5 %
:RPS:SCOP  13->89 2fd5A1  a.4.1.9 * 8e-11 26.7 %
:HMM:SCOP  14->90 2gfnA1 a.4.1.9 * 3e-16 37.7 %
:HMM:SCOP  92->199 1vi0A2 a.121.1.1 * 0.00012 27.1 %
:RPS:PFM   24->70 PF00440 * TetR_N 7e-05 40.4 %
:HMM:PFM   24->70 PF00440 * TetR_N 1.1e-17 42.6 47/47  
:HMM:PFM   192->248 PF05438 * TRH 0.00015 27.3 55/212  
:BLT:SWISS 21->72 TETR3_ECOLX 4e-06 38.5 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68592.1 GT:GENE BAC68592.1 GT:PRODUCT putative TetR-family transcriptional regulator GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION complement(1056028..1056786) GB:FROM 1056028 GB:TO 1056786 GB:DIRECTION - GB:PRODUCT putative TetR-family transcriptional regulator GB:NOTE PF00440: Bacterial regulatory proteins, tetR family GB:PROTEIN_ID BAC68592.1 LENGTH 252 SQ:AASEQ MEPNLRYHRFMATRDSTDTPRRRIVEAAVELLENGGPDAMSTRAVAAAAGMQPPAIYRLFGDKEGLLEAVAEHGYAQFLERKRAQLDPAPQDPVEELRRGWDMVVEFGVCRPELFAVMNRATGRGSDAAHRAGLEILHGRVRRLAAGGWLRVDEELAAQIIQATGQGAVTTWHSTPADRRNPALLTVLRESMVAAVTRAEPTVPTAESGPAAAARALRAALPDDADVLSDAEQRLLREWLTRLAADGGAPHA GT:EXON 1|1-252:0| BL:SWS:NREP 1 BL:SWS:REP 21->72|TETR3_ECOLX|4e-06|38.5|52/219| SEG 44->49|avaaaa| SEG 157->168|aaqiiqatgqga| SEG 210->225|paaaaralraalpdda| BL:PDB:NREP 1 BL:PDB:REP 23->89|3bniB|5e-07|32.8|67/171| RP:PDB:NREP 1 RP:PDB:REP 21->200|3b81A|2e-13|13.5|171/181| RP:PFM:NREP 1 RP:PFM:REP 24->70|PF00440|7e-05|40.4|47/47|TetR_N| HM:PFM:NREP 2 HM:PFM:REP 24->70|PF00440|1.1e-17|42.6|47/47|TetR_N| HM:PFM:REP 192->248|PF05438|0.00015|27.3|55/212|TRH| GO:PFM:NREP 2 GO:PFM GO:0003700|"GO:transcription factor activity"|PF00440|IPR001647| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00440|IPR001647| RP:SCP:NREP 1 RP:SCP:REP 13->89|2fd5A1|8e-11|26.7|75/76|a.4.1.9| HM:SCP:REP 14->90|2gfnA1|3e-16|37.7|77/0|a.4.1.9|1/1|Homeodomain-like| HM:SCP:REP 92->199|1vi0A2|0.00012|27.1|107/0|a.121.1.1|1/1|Tetracyclin repressor-like, C-terminal domain| OP:NHOMO 20 OP:NHOMOORG 15 OP:PATTERN -------------------------------------------------------------------- ----1----------------2---1-----------11-----2----1---11---------3--1-1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2--------------------------------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 195 STR:RPRED 77.4 SQ:SECSTR ############ccccHHHHHHHHHHHHHHHHHHHccTTccHHHHHHHHTccHHHHHTTcccHHHHHHHHHHHHHHHHHHHHHHHccTTcccHHHHHHHHHTccccccHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTccccccHHHHHHHHHHHHHTTTcHHHHTccGGGHHHHHHHHHHHHHHHTccTGGGTHHH############################################# DISOP:02AL 1-22, 205-206, 249-252| PSIPRED ccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHccccccHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHccccccc //