[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Streptomyces avermitilis MA-4680 (save0)
Gene : BAC68594.1
DDBJ      :             putative IS481 family ISAni1-like transposase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  123/915 : Eukaryota  4/199 : Viruses  0/175   --->[See Alignment]
a.4.1c.55.3
:327 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   229->277 1vskA PDBj 2e-05 40.8 %
:RPS:PDB   3->195 3btaA PDBj 2e-08 7.6 %
:RPS:PDB   180->302 1cz9A PDBj 5e-12 26.1 %
:RPS:SCOP  8->106 1pdnC  a.4.1.5 * 4e-08 21.9 %
:RPS:SCOP  179->315 1b92A  c.55.3.2 * 8e-10 17.2 %
:HMM:SCOP  4->110 1pdnC_ a.4.1.5 * 3e-16 30.8 %
:HMM:SCOP  131->319 1c6vA_ c.55.3.2 * 1.4e-32 38.4 %
:RPS:PFM   14->49 PF03514 * GRAS 6e-04 41.7 %
:RPS:PFM   133->274 PF00665 * rve 8e-16 48.6 %
:HMM:PFM   130->278 PF00665 * rve 3.6e-38 47.5 118/120  
:HMM:PFM   16->64 PF01527 * Transposase_8 2.5e-07 30.2 43/76  
:BLT:SWISS 23->326 YAGA_ECOLI 6e-24 37.7 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68594.1 GT:GENE BAC68594.1 GT:PRODUCT putative IS481 family ISAni1-like transposase GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION 1057857..1058840 GB:FROM 1057857 GB:TO 1058840 GB:DIRECTION + GB:PRODUCT putative IS481 family ISAni1-like transposase GB:NOTE PF00665: Integrase core domain GB:PROTEIN_ID BAC68594.1 LENGTH 327 SQ:AASEQ MPHPHARLTVHGRRLLVDRVRAGRPIAHVAEEMGISRTTAHKWVRRWRAEGDPGLYDRSSRPLTTPHRTPADVENRICELRRDRKLGPARIGPVLGIPSSTVHRVLTHYGLNRLRWMDRPTGQIIRRYERSHPGELVDVDIKKLGNIPDGGGHRIMPRQQAAGNRQATTDVRRGGSPVIGYSFVHTAVDDHSRLAYSEVLTDERKETAASFWQRANTFFAEHGISVERVLTDNGSCYRSRLFGQTLSATGIVHKRTRPYRPQTNGKVERLNRTLLDEWAYVRPYSSNAERTEALTDFLHTYNYHRCHTALDGQPPISRVNNPAGQYI GT:EXON 1|1-327:0| BL:SWS:NREP 1 BL:SWS:REP 23->326|YAGA_ECOLI|6e-24|37.7|265/384| BL:PDB:NREP 1 BL:PDB:REP 229->277|1vskA|2e-05|40.8|49/146| RP:PDB:NREP 2 RP:PDB:REP 3->195|3btaA|2e-08|7.6|170/1277| RP:PDB:REP 180->302|1cz9A|5e-12|26.1|119/139| RP:PFM:NREP 2 RP:PFM:REP 14->49|PF03514|6e-04|41.7|36/372|GRAS| RP:PFM:REP 133->274|PF00665|8e-16|48.6|109/116|rve| HM:PFM:NREP 2 HM:PFM:REP 130->278|PF00665|3.6e-38|47.5|118/120|rve| HM:PFM:REP 16->64|PF01527|2.5e-07|30.2|43/76|Transposase_8| GO:PFM:NREP 2 GO:PFM GO:0003677|"GO:DNA binding"|PF00665|IPR001584| GO:PFM GO:0015074|"GO:DNA integration"|PF00665|IPR001584| RP:SCP:NREP 2 RP:SCP:REP 8->106|1pdnC|4e-08|21.9|96/123|a.4.1.5| RP:SCP:REP 179->315|1b92A|8e-10|17.2|122/144|c.55.3.2| HM:SCP:REP 4->110|1pdnC_|3e-16|30.8|104/0|a.4.1.5|1/1|Homeodomain-like| HM:SCP:REP 131->319|1c6vA_|1.4e-32|38.4|146/0|c.55.3.2|1/1|Ribonuclease H-like| OP:NHOMO 872 OP:NHOMOORG 127 OP:PATTERN -------------------------------------------------------------------- B----------2-2-7A----1--91------2B1A3-1-------14-2*6--265------1---4A1----------------D---------7--------2-----------------------1-------------------------------------------------------------1--------------------------------------------------------------------------------------------------------------------------------------------------Q------------1--------2--------------------------3-71E-2----1132122312--1-3--6---1------2-------5--------46-1--32433443-C6P----------------------22V------5---------9*--34-3-D------1---------2---4-------J----1-3-----------------dD6-----------1--22--9--3---3----2--------------------------------1--------------1----1--5--1--------1--------4----1---1--------1----------------1------1-----------------------------------------------1-21-----321--------------------------1----------------------------12112---1555----------------------------------------------------------------------- ------------7---------------------------------------------------------------------------------------------------------------------------------------------------------1-----------------------------28- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 320 STR:RPRED 97.9 SQ:SECSTR ##TTcccTccccccEEEEEHcccccccccEEEEEEETTEHHHEEEEEEHTTHHHHHHHHHcccccGGGccccccccccccccccccHHcTTTTccHHHHHHHHHHHHHHHHHHHHTcHHHHHHHHHHHHccccccTTccTTcccccGGGEEEEEcTTccEEEEEEEccccTTcEcGGGETccEEEEEEETTTccEEEEEEccccHHHHHHHHHHHHHHHccccEEEcEEEEEccHHHHcHHHHHHHHHHTcEEEEEcTTcHHHHHHHHHHHHHHHHHHHHHHHHTTccccHHHHHHHHHHHccHccGGGcccccHHHHHHHc##### DISOP:02AL 1-4, 57-68, 323-327| PSIPRED cccccccccHHHHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHHHHccHHHHcccccccccccccccHHHHHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHcccHHHHHHcccccccHHHHHHHccccEEEEEEEEcccccccccccccccccccccccccEEEEEcccccccEEEEEEEEEccccEEEEEEEccccHHHHHHHHHHHHHHHHHccccEEEEEEccccHHHHHHHHHHHHHcccEEEEEcccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccccccccccccHHHHHccccccc //