[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Streptomyces avermitilis MA-4680 (save0)
Gene : BAC68597.1
DDBJ      :             putative glycosyl hydrolase
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  108/915 : Eukaryota  108/199 : Viruses  0/175   --->[See Alignment]
b.1.4b.18.1c.1.8
:1354 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   261->559,839->1346 2vzoA PDBj 4e-38 29.7 %
:BLT:PDB   619->794 2vcbA PDBj 4e-07 24.0 %
:RPS:PDB   40->205 1d7pM PDBj 3e-08 18.3 %
:RPS:PDB   220->561 1dp0A PDBj 1e-25 21.1 %
:RPS:PDB   618->849 3cqoA PDBj 1e-16 14.1 %
:RPS:PDB   852->1242 3bgaB PDBj 9e-18 11.7 %
:RPS:SCOP  45->205 1tvgA  b.18.1.9 * 4e-14 9.2 %
:RPS:SCOP  265->441 2je8A4  b.18.1.5 * 1e-24 28.7 %
:RPS:SCOP  446->559 2vzsA1  b.1.4.1 * 1e-17 33.6 %
:RPS:SCOP  619->752 1tvgA  b.18.1.9 * 2e-16 10.4 %
:RPS:SCOP  760->847 1jhjA  b.18.1.9 * 4e-18 10.2 %
:RPS:SCOP  854->1150 2vzsA5  c.1.8.3 * 1e-26 25.4 %
:RPS:SCOP  1151->1249 2vzsA3  b.1.4.1 * 3e-20 25.3 %
:RPS:SCOP  1236->1349 2vzsA2  b.1.4.1 * 6e-10 21.9 %
:HMM:SCOP  36->205 1d7pM_ b.18.1.2 * 1.9e-21 25.9 %
:HMM:SCOP  235->443 1yq2A3 b.18.1.5 * 5e-32 34.7 %
:HMM:SCOP  462->560 1bhgA1 b.1.4.1 * 1.1e-12 29.6 %
:HMM:SCOP  612->753 1sddB4 b.18.1.2 * 3e-26 31.7 %
:HMM:SCOP  756->860 1tvgA_ b.18.1.9 * 8.8e-25 39.0 %
:HMM:SCOP  840->1150 1yq2A5 c.1.8.3 * 2.9e-39 24.2 %
:RPS:PFM   238->379 PF02837 * Glyco_hydro_2_N 7e-07 33.1 %
:RPS:PFM   457->559 PF00703 * Glyco_hydro_2 5e-05 36.6 %
:RPS:PFM   627->744 PF00754 * F5_F8_type_C 3e-05 32.0 %
:RPS:PFM   767->841 PF00754 * F5_F8_type_C 1e-08 50.7 %
:RPS:PFM   854->973 PF02836 * Glyco_hydro_2_C 2e-09 32.8 %
:HMM:PFM   58->195 PF00754 * F5_F8_type_C 1.6e-17 27.9 111/129  
:HMM:PFM   628->746 PF00754 * F5_F8_type_C 1.5e-24 31.9 113/129  
:HMM:PFM   768->845 PF00754 * F5_F8_type_C 8.3e-24 47.4 78/129  
:HMM:PFM   239->382 PF02837 * Glyco_hydro_2_N 4.1e-18 28.7 122/160  
:HMM:PFM   448->559 PF00703 * Glyco_hydro_2 1.5e-16 32.0 103/110  
:HMM:PFM   902->978 PF02836 * Glyco_hydro_2_C 2.6e-08 34.2 76/298  
:HMM:PFM   1265->1331 PF07705 * CARDB 0.00019 26.7 60/101  
:BLT:SWISS 236->560 EBM_LILLO 6e-31 29.4 %
:BLT:SWISS 688->849 NAGH_CLOPE 3e-04 25.3 %
:BLT:SWISS 825->1187,1285->1348 EBM_ARATH 9e-50 36.2 %
:REPEAT 2|567->705|708->845
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68597.1 GT:GENE BAC68597.1 GT:PRODUCT putative glycosyl hydrolase GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION 1061121..1065185 GB:FROM 1061121 GB:TO 1065185 GB:DIRECTION + GB:PRODUCT putative glycosyl hydrolase GB:NOTE PF00754: F5/8 type C domain GB:PROTEIN_ID BAC68597.1 LENGTH 1354 SQ:AASEQ MSTQPPRPSRRSVLATGSTLLAGFGLGVTLPQTSYAVTPSRPTGERGELATYRPVSVSSTDYAPTPAEFVVDKVNSVGVKGTGWRAADGDPQWISVDLQTDCTVDSVHLTFEATADDPVFVPSTSGNPRDRTTGQEVLSSCAVEFVVETSRDHHAWTTVHRTTSGKGGMVEIPLDKPVTARWVRLTVTKRSNANPLGLNGFEVYGSAGGHRPSATGWTDWGTHDHRAPALKAAADGTVPLESGWTLTMDDWAGGKGAQLSRPDVDTSRWLPATVPGTVLASLVDQGHLPDPVAGFNNLHIPEALSRHSWWYRRGFELPRALRTGPGRHIWLEFDGVNHTAEIWLNGQKVGGLTYPFARSSHDVTKMLAGNGEQALAVKITPMPFPGSPGDKGPAGLAFVDAGATMMNQNSPTYLAASGWDWMPAVRDRVSGIWNHVRLRSTGHAVIGDPRVDTKLPDLPDTSRAEVTIVVPVRNVGSASKRVTVTAAFDDVRVSRSVTVAGGESADVTFAPSTYAALRLRDPELWWPNGYGRPDLHDLTLTASIDGEESDRRTTRFGIRQFGYEYTVPLPFGGSSDRYTQPVLLGVQKARYVRIKCLTRATDWGFSLWTLSVVDSTSAGTDLALHKTATASTEDSGNTAAKVTDADPGSRWSSAFEDGQWIQVDLGSVAAFDRVDLTWEKAYAKTFVVQVSTDGSTWTDARSVDNGAVPLPFNSGAASLQTVDFAARTSRYVRINCGARATSWGISLWTLSVVDSSSPGTDLALRRTATASTEDSGKPASNATDGNPDSRWSSEYQDDQWIQVDLGSSVSFDRVAIVWEQAYPKTYVIQVSDDGDAWTDVKSVDNTPDPLKISVNGVRVFCRGGNWGWDELLRRMPAARMDAAVRMHRDMNFTMIRNWVACSNREEFFASCDEHGLLVWNDFPNAWAMDPPDHTAYNDLARDTVRRYRIHPSVVIWCGANEGNPPEAIDKGMREAVRSEAPDVLYQNNSAGGIVTGGGPYGWVEPERYFSPATYGSGDFGFHTEIGMPVVSTAESMRNLVGDEPEWPISGAWLYHDWSTRGNQAPQNYRAAIETRLDTAEDLDDFTRKAQFVNYENARAMFEAWNQNLWQDASGLMLWMSHPAWHSTVWQTYDYDFDVNGMYYGSRTACEPVHVQADPKNWQVIAVNHTPRRLKDVTVTARAYDLGGKQLGSTRRATVSVPSSATAEAFTAAFASSLPDFHLLRLSLQDGRGRLLSQNTYWRYRRASDMKALNKARTVRVSADIGQVTRAGSRRTATARIHNRGSAVAAMVRLSLLDSRTDARVLPTLYSDNYVWLLPDESRTVTLSWPADALPSGRPALRVEGYNVPRTVARS GT:EXON 1|1-1354:0| BL:SWS:NREP 3 BL:SWS:REP 236->560|EBM_LILLO|6e-31|29.4|307/953| BL:SWS:REP 688->849|NAGH_CLOPE|3e-04|25.3|150/1628| BL:SWS:REP 825->1187,1285->1348|EBM_ARATH|9e-50|36.2|420/944| NREPEAT 1 REPEAT 2|567->705|708->845| SEG 1202->1216|ssataeaftaafass| SEG 1268->1279|tragsrrtatar| BL:PDB:NREP 2 BL:PDB:REP 261->559,839->1346|2vzoA|4e-38|29.7|761/850| BL:PDB:REP 619->794|2vcbA|4e-07|24.0|167/882| RP:PDB:NREP 4 RP:PDB:REP 40->205|1d7pM|3e-08|18.3|142/159| RP:PDB:REP 220->561|1dp0A|1e-25|21.1|299/1011| RP:PDB:REP 618->849|3cqoA|1e-16|14.1|227/293| RP:PDB:REP 852->1242|3bgaB|9e-18|11.7|383/980| RP:PFM:NREP 5 RP:PFM:REP 238->379|PF02837|7e-07|33.1|121/155|Glyco_hydro_2_N| RP:PFM:REP 457->559|PF00703|5e-05|36.6|93/109|Glyco_hydro_2| RP:PFM:REP 627->744|PF00754|3e-05|32.0|104/126|F5_F8_type_C| RP:PFM:REP 767->841|PF00754|1e-08|50.7|75/126|F5_F8_type_C| RP:PFM:REP 854->973|PF02836|2e-09|32.8|119/258|Glyco_hydro_2_C| HM:PFM:NREP 7 HM:PFM:REP 58->195|PF00754|1.6e-17|27.9|111/129|F5_F8_type_C| HM:PFM:REP 628->746|PF00754|1.5e-24|31.9|113/129|F5_F8_type_C| HM:PFM:REP 768->845|PF00754|8.3e-24|47.4|78/129|F5_F8_type_C| HM:PFM:REP 239->382|PF02837|4.1e-18|28.7|122/160|Glyco_hydro_2_N| HM:PFM:REP 448->559|PF00703|1.5e-16|32.0|103/110|Glyco_hydro_2| HM:PFM:REP 902->978|PF02836|2.6e-08|34.2|76/298|Glyco_hydro_2_C| HM:PFM:REP 1265->1331|PF07705|0.00019|26.7|60/101|CARDB| GO:PFM:NREP 8 GO:PFM GO:0004553|"GO:hydrolase activity, hydrolyzing O-glycosyl compounds"|PF02837|IPR006104| GO:PFM GO:0005975|"GO:carbohydrate metabolic process"|PF02837|IPR006104| GO:PFM GO:0004553|"GO:hydrolase activity, hydrolyzing O-glycosyl compounds"|PF00703|IPR006102| GO:PFM GO:0005975|"GO:carbohydrate metabolic process"|PF00703|IPR006102| GO:PFM GO:0007155|"GO:cell adhesion"|PF00754|IPR000421| GO:PFM GO:0007155|"GO:cell adhesion"|PF00754|IPR000421| GO:PFM GO:0004553|"GO:hydrolase activity, hydrolyzing O-glycosyl compounds"|PF02836|IPR006103| GO:PFM GO:0005975|"GO:carbohydrate metabolic process"|PF02836|IPR006103| RP:SCP:NREP 8 RP:SCP:REP 45->205|1tvgA|4e-14|9.2|129/136|b.18.1.9| RP:SCP:REP 265->441|2je8A4|1e-24|28.7|171/192|b.18.1.5| RP:SCP:REP 446->559|2vzsA1|1e-17|33.6|107/110|b.1.4.1| RP:SCP:REP 619->752|1tvgA|2e-16|10.4|127/136|b.18.1.9| RP:SCP:REP 760->847|1jhjA|4e-18|10.2|88/161|b.18.1.9| RP:SCP:REP 854->1150|2vzsA5|1e-26|25.4|295/339|c.1.8.3| RP:SCP:REP 1151->1249|2vzsA3|3e-20|25.3|99/103|b.1.4.1| RP:SCP:REP 1236->1349|2vzsA2|6e-10|21.9|114/121|b.1.4.1| HM:SCP:REP 36->205|1d7pM_|1.9e-21|25.9|143/159|b.18.1.2|1/3|Galactose-binding domain-like| HM:SCP:REP 235->443|1yq2A3|5e-32|34.7|173/0|b.18.1.5|1/1|Galactose-binding domain-like| HM:SCP:REP 462->560|1bhgA1|1.1e-12|29.6|98/0|b.1.4.1|1/1|beta-Galactosidase/glucuronidase domain| HM:SCP:REP 612->753|1sddB4|3e-26|31.7|139/158|b.18.1.2|2/3|Galactose-binding domain-like| HM:SCP:REP 756->860|1tvgA_|8.8e-25|39.0|105/0|b.18.1.9|4/4|Galactose-binding domain-like| HM:SCP:REP 840->1150|1yq2A5|2.9e-39|24.2|256/0|c.1.8.3|1/1|(Trans)glycosidases| OP:NHOMO 378 OP:NHOMOORG 217 OP:PATTERN -----------------------------1-------------------------------------- 221-K----------------------------------------1--1------1----31-11-1667------------------1152-211-----2---9-1-1---------------------------1122---5-1---------------------------------------1111----------------------------1-------------9------------------------------------------------------------------------------------------1---1----------1----11---1-------------2----1-2------1---------------------------------------------311133133311--------------------------------------------------------------1---------1111------11--------2-----1--111-----------------1-------------------------------------------2-----------------------------------8--1--1---------------------------------------------------------------------11----------------------------------------------------------2----------------------------5----------------------------111-----11-1122222221111111------------------------------------------------1--1-111-2- ----111--------2121222221231111112222111-111111124434122244222---------------------------1321211---1--------112111221-11--1111-1-171-122----1--11-1---1--2-11111-1112-1---1--11---------12111211-11---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 1259 STR:RPRED 93.0 SQ:SECSTR #######################################cEEccTTTcGGGGcEEEEccccccTTcccccGcGGGccTTccccccccccTTccEEEEEEEEEEEEEEEEEccccccGGEEEcEEETTEEEEEEEcccccccccEEEEEEEccccccEEcccTTccccccEEEEEEEEEEEEEEEEEEEEEEcccEEEEEEEEEEE####EccccccccEcccccHHHHHHTcccTTEEEccEEEEEEEEccGGGccTHGHHHHcccTTcEEEEEcccGGGGTccccEEEcccccccccTTcccccccEEEEEEEEEEcHHHHccHccEEEEEEccEEcEEEEEETTEEEEEEEcTTccEEEEcTTTccccEEEEEEEEEEcccGGGGGcccccEEcccccccccEEcccGGGGGccccccEEEccEEEccEEcccEEEEEEcccEEEEEEEEEEEcTcTTccEEEEEEEEEEEccccTTEEEEEEEEETTEEEEEEEEEcccccccTTcccTTEEEEEEEcccccccccccccccEEEEEEEETTccEEEEEEEEEccccEEEccTEEEETTT############################################ccEEGGGGcEEEEcccccTccGGGGGcccccccGGGccccccEEEEEEEEEEEEEEEEEEcGGGTTEEEEEEcccGGGGTTccEEEEEcccEEccccTTcEEEEEcccccEEEEEEEEcccccccccccEEEEEEEEcGGGGcEEEEccccTTccGGGGGcccccccGGGTcccccccEEccEEEEEEEEEEEEEEEEEEcGGGTTEEEEEEcccGGGGTTccEEEEEccccccEEETTEEccEEEEEcccccTcTcccHHHHHHHHHHHHHTTccEEEcTTcccccHHHHHHHHHHTcEEEEEcccccTTcccTTTHHHHHHHHHHHHHTTcTTEEEEEccccccccHHHHHHHHHHHHHHcTTccEEccTTTcccTTccccccccccccHHHTcTTccccEEEEEEccccccccTTHHHHHHHHHHcTTEEEEEEcccccccEcTTccEEEEcTTTTccccccGGGGccccccTTccccTHHHHHHHHTccEEEEEETTEEEEEEcccccccTTcEEEEEEEETTEEEEEEEEEccccTTcEEEEEcccccccccTTTccEEEEEETTEEcEEEEEEEEccTTccTTcccccccEEEEEcTTTccEEEEETTEEcccEEEcccEccccccGGGGGcccccEEEEEEEEEcTTcEEEEEEEEEEcccccEEEEEEEEEcTETcccccccEEccccEEEcTTcEEEEEEEEEGGGGTTcccEEEEEETT######## DISOP:02AL 1-11, 59-62, 1353-1354| PSIPRED cccccccccccccccEEccHHHHcccHHHHHHHHcccccccccccccHHHcccEEEEEEccccccccHHEEccccccccccccccccccccEEEEEEccccEEccEEEEEEcccccccccccccccccccccccccccccccEEEEEEEcccccEEEEEEEEccccccEEEEEccccccEEEEEEEEEEEcccccEEEEEEEEEEccccccccccccccccccccccHHHccccccEEEEcccEEEEEccccccccccccccccccccccEEEcccHHHHHHHHccccccccccccccccccccccccEEEEEEEEEcHHHHcccccEEEEEEccccEEEEEEEccEEEEEcccccEEEEEEEHHHHcccccEEEEEEEEcccccccccccccccccccccccEEEEEEccEEEEccccccccccccccccccccEEEEEEcEEEEEEEEEEEEEcccccccEEEEEEEEEEEEcccccEEEEEEEEEccccEEEEEEEccccEEEEEEcccEEEEEEEccccccccccccccEEEEEEEEEEEcccEEEEEEEEEEEEEEEEEccccEEcccccccEEEEEEccccccEEEEEEEEccccccEEEEEEEEEEcccccccccccccEEEEccccccccccEEEEcccccEEccccccccEEEEEcccEEEEEEEEEEEcccccEEEEEEEEccccEEEEEEEEcccEEccccccccccEEEEEcccEEEEEEEEEEEcccccccEEEEEEcccccccccccccccccEEEEcccccccEEEEEEcccccEEccccccccEEEEEccEEEEEEcEEEcccccccEEEEEEEEEccEEEEEEEEEEcccccEEEEEccEEEEEEEEEEccccccccccHHHHHHHHHHHHHccccEEEEccccccHHHHHHHHHHccEEEEHHHHHHcccccccHHHHHHHHHHHHHHHccccEEEEEEcccccccHHHHHHHHHHHHHHHccccEEEccccccccccccEEccccccccccccccccccccEEEEEcccccccHHHHHHHcccccccccccEEEcccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEEcccccccEEEEEEEcccccHHHHHHHHHcccEEEEEEccccEEEEEEcccccccccEEEEEEEEccccEEEEEEEEEEEEccccEEEEEEEccccccccEEEEEEEEEccccEEccccEEEccccHHHHHcccHHHcEEccccEEEEEEccccEEEEEEEEEcccccEEEEEEEEEccccccEEEcEEEccccEEcccccEEEEEEEEcccccccccEEEEEEEEccccccccc //