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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC68623.1
DDBJ      :             putative TetR-family transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  31/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.121.1a.4.1
:193 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   20->114 2np3B PDBj 8e-10 38.7 %
:RPS:PDB   17->132 3btiB PDBj 1e-10 19.0 %
:RPS:SCOP  17->64 1jt0A1  a.4.1.9 * 4e-11 27.1 %
:RPS:SCOP  83->191 2np3A2  a.121.1.1 * 6e-11 23.5 %
:HMM:SCOP  11->75 2id3A1 a.4.1.9 * 4e-13 36.9 %
:HMM:SCOP  82->193 2np3A2 a.121.1.1 * 1e-28 40.2 %
:RPS:PFM   21->65 PF00440 * TetR_N 7e-04 42.2 %
:HMM:PFM   21->65 PF00440 * TetR_N 2.8e-16 40.0 45/47  
:HMM:PFM   71->97 PF12390 * Se-cys_synth_N 2.3e-05 44.4 27/40  
:HMM:PFM   89->138 PF11984 * DUF3485 0.00015 26.0 50/206  
:BLT:SWISS 9->96 Y3439_MYCBO 2e-07 36.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68623.1 GT:GENE BAC68623.1 GT:PRODUCT putative TetR-family transcriptional regulator GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION 1092937..1093518 GB:FROM 1092937 GB:TO 1093518 GB:DIRECTION + GB:PRODUCT putative TetR-family transcriptional regulator GB:NOTE PF00440: Bacterial regulatory proteins, tetR family GB:PROTEIN_ID BAC68623.1 LENGTH 193 SQ:AASEQ MTSGTEITSTDKRSDRTRAAILRAARERFAAQGYERTTIRAVAADADIDPSMVMRYFGNKAQLFDMALAIDLRLPDLTAVAPDELARALVRHFLDRWEGDPADDALLVLLRSAVTNEHAAARMHEIFATQIAPSLASALGPELAARRAGLISSQLLGLGLTRYLLRLPAVTALTRDEIEDGLAPAIKATLESS GT:EXON 1|1-193:0| BL:SWS:NREP 1 BL:SWS:REP 9->96|Y3439_MYCBO|2e-07|36.0|86/188| SEG 149->167|glissqllglgltryllrl| BL:PDB:NREP 1 BL:PDB:REP 20->114|2np3B|8e-10|38.7|93/174| RP:PDB:NREP 1 RP:PDB:REP 17->132|3btiB|1e-10|19.0|116/186| RP:PFM:NREP 1 RP:PFM:REP 21->65|PF00440|7e-04|42.2|45/47|TetR_N| HM:PFM:NREP 3 HM:PFM:REP 21->65|PF00440|2.8e-16|40.0|45/47|TetR_N| HM:PFM:REP 71->97|PF12390|2.3e-05|44.4|27/40|Se-cys_synth_N| HM:PFM:REP 89->138|PF11984|0.00015|26.0|50/206|DUF3485| GO:PFM:NREP 2 GO:PFM GO:0003700|"GO:transcription factor activity"|PF00440|IPR001647| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00440|IPR001647| RP:SCP:NREP 2 RP:SCP:REP 17->64|1jt0A1|4e-11|27.1|48/71|a.4.1.9| RP:SCP:REP 83->191|2np3A2|6e-11|23.5|102/104|a.121.1.1| HM:SCP:REP 11->75|2id3A1|4e-13|36.9|65/0|a.4.1.9|1/1|Homeodomain-like| HM:SCP:REP 82->193|2np3A2|1e-28|40.2|112/0|a.121.1.1|1/1|Tetracyclin repressor-like, C-terminal domain| OP:NHOMO 56 OP:NHOMOORG 31 OP:PATTERN -------------------------------------------------------------------- ----1---------3------2--63-----32333122213----------1-------11---112111------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------1----------------1----1---------------------------1---------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 139 STR:RPRED 72.0 SQ:SECSTR #########cccHHHHcHHHHHHHHHHHHHHcccccccHHHHHHTTTcccTTTTTTcccHHHHHHHHHHHHHHTTcTTcccHHHHHHHHHHHHHHccccTTTHHHHHHHTTcccccTTcTTTHHHHHHHHHHTTccHHHHHHHHHHHH############################################# DISOP:02AL 1-20| PSIPRED cccccccccccccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHcccHHHHHHHcccHHHHHHHHHHHHHcHHHHHHccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHccc //