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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC68678.1
DDBJ      :             putative simple sugar ABC transporter permease protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  328/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
:332 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   64->264 PF02653 * BPD_transp_2 3e-05 31.0 %
:HMM:PFM   52->318 PF02653 * BPD_transp_2 8e-50 32.7 260/267  
:HMM:PFM   15->42 PF09976 * DUF2133 7.6e-05 32.1 28/43  
:BLT:SWISS 46->264 RBSC_BACSU 1e-24 40.1 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68678.1 GT:GENE BAC68678.1 GT:PRODUCT putative simple sugar ABC transporter permease protein GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION complement(1227720..1228718) GB:FROM 1227720 GB:TO 1228718 GB:DIRECTION - GB:PRODUCT putative simple sugar ABC transporter permease protein GB:NOTE PF02653: Branched-chain amino acid transport system / permease component GB:PROTEIN_ID BAC68678.1 LENGTH 332 SQ:AASEQ MSASGVEAGRGSGVVRGERLSALAQQHGALVALLVLALVASFSFDSFATGDNIENLAMTSSFLAVVALGMTFVIVTGGIDLSVGSVFALGGVLAAWGSRYGALVALLLPLAVCGLIGCVNGLLIARTRLAPFIVTLAAMLAARGLMLNITDEGATTYLVDKETVFVHLGQGRLLGVGAPVWITGALFLAGAVALRRTRFGQNVYAVGGNEDAAALMGAPVARTKITVYTLSALLAGLAGALNAAWLASGVTILGYGMELDAIAAVVIGGTLLSGGLGFVSGSLVGVLLLKTIQNIINQIGSLDSAYQQVVSGGFLVVVIIAQTWLARRRRVA GT:EXON 1|1-332:0| BL:SWS:NREP 1 BL:SWS:REP 46->264|RBSC_BACSU|1e-24|40.1|217/322| TM:NTM 8 TM:REGION 26->48| TM:REGION 66->88| TM:REGION 102->124| TM:REGION 128->150| TM:REGION 173->194| TM:REGION 230->252| TM:REGION 267->289| TM:REGION 303->325| SEG 22->40|alaqqhgalvallvlalva| SEG 102->112|alvalllplav| SEG 136->147|laamlaarglml| SEG 230->249|lsallaglagalnaawlasg| SEG 265->289|vviggtllsgglgfvsgslvgvlll| RP:PFM:NREP 1 RP:PFM:REP 64->264|PF02653|3e-05|31.0|200/271|BPD_transp_2| HM:PFM:NREP 2 HM:PFM:REP 52->318|PF02653|8e-50|32.7|260/267|BPD_transp_2| HM:PFM:REP 15->42|PF09976|7.6e-05|32.1|28/43|DUF2133| GO:PFM:NREP 3 GO:PFM GO:0005215|"GO:transporter activity"|PF02653|IPR001851| GO:PFM GO:0006810|"GO:transport"|PF02653|IPR001851| GO:PFM GO:0016020|"GO:membrane"|PF02653|IPR001851| OP:NHOMO 986 OP:NHOMOORG 330 OP:PATTERN -------------------------------------------------------------------- --2-5-----------------11-5-------111-12-2--121---2-1223--------1113424------------3------------------------1-2--------------------------21111---1------------------------1-------------32---23-311333323231322323121111332-33-111-------2------------------1--1--11----------1------1-1111-1-1------------------------------------1-2--1-----1--1--2--1---3211----1----1-111-1--21-----2-11--------533--------3222322122A---------19--C997B8BCD7FF1-----432-22121--------811-----------------------------------------11--6556554333244A7333425658-2----3312-2--111349-------1------------------------1------------------3-----------------------------224--1----3----2--22221--2-2---------------53352544335443433-34444353433445545556665511111111111111111-1542332331-5AAABAAA9BBA---------------117111312-11222243----------11------14------222----------11131111112111-------------------------------------------------------------121-14251-1- --------------------------------------------------------------------------------------------------------------------------------------------------------------1----1----------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-4, 6-18, 329-332| PSIPRED ccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHccHHHHEEEEEcccHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccccc //