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Streptomyces avermitilis MA-4680 (save0)
Gene : BAC68681.1
DDBJ      :             putative simple sugar ABC transporter substrate-binding protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  381/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.93.1
:371 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   86->369 2vk2A PDBj 3e-45 36.2 %
:RPS:PDB   86->353 2driA PDBj 3e-40 33.8 %
:RPS:SCOP  86->353 1ba2A  c.93.1.1 * 2e-40 33.8 %
:HMM:SCOP  84->363 2fvyA1 c.93.1.1 * 1.4e-76 40.4 %
:RPS:PFM   97->306 PF00532 * Peripla_BP_1 2e-28 38.1 %
:HMM:PFM   97->309 PF00532 * Peripla_BP_1 7.5e-21 29.9 204/279  
:BLT:SWISS 86->369 YTFQ_ECOLI 9e-45 36.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAC68681.1 GT:GENE BAC68681.1 GT:PRODUCT putative simple sugar ABC transporter substrate-binding protein GT:DATABASE GIB00135CH01 GT:ORG save0 GB:ACCESSION GIB00135CH01 GB:LOCATION complement(1231383..1232498) GB:FROM 1231383 GB:TO 1232498 GB:DIRECTION - GB:PRODUCT putative simple sugar ABC transporter substrate-binding protein GB:NOTE PF00532: Periplasmic binding proteins and sugar binding domain of the LacI family GB:PROTEIN_ID BAC68681.1 LENGTH 371 SQ:AASEQ MKSNSAFRRMPAMSRRTSATSLLAAGLVAGLALCTGCTKSESDASGSNSSAAGGDSSQVVATPGADSKTCDIATFGGKKLDLKTATVGFSQSEKEANPFRIAETASLKAEAGKRGVKLLTANAQSQFSKQISDVQDLIAKGADLLVIAPLNSDGWEPVLRQAAAKKIPIVTVDRKINATPCTDYVSFIGSDFTEQGKRAADEMIKATGGKGEVAILLGAAGNNVTTERTKGFEDRLQEKAPGLKIVFRQTGEFAREKGQSVTENLIQSKPGITGVYAENDEMGLGAVNALKSAGKKPGDVKIVTVDGTRNAVQGIVDGWIDGVIESNPRFGPLAFQTLDSFTKGAKVGQDIVIQDSAYTKGNATSDIGKAY GT:EXON 1|1-371:0| BL:SWS:NREP 1 BL:SWS:REP 86->369|YTFQ_ECOLI|9e-45|36.2|282/318| SEG 17->33|tsatsllaaglvaglal| SEG 40->57|sesdasgsnssaaggdss| BL:PDB:NREP 1 BL:PDB:REP 86->369|2vk2A|3e-45|36.2|282/296| RP:PDB:NREP 1 RP:PDB:REP 86->353|2driA|3e-40|33.8|260/271| RP:PFM:NREP 1 RP:PFM:REP 97->306|PF00532|2e-28|38.1|202/261|Peripla_BP_1| HM:PFM:NREP 1 HM:PFM:REP 97->309|PF00532|7.5e-21|29.9|204/279|Peripla_BP_1| RP:SCP:NREP 1 RP:SCP:REP 86->353|1ba2A|2e-40|33.8|260/271|c.93.1.1| HM:SCP:REP 84->363|2fvyA1|1.4e-76|40.4|277/0|c.93.1.1|1/1|Periplasmic binding protein-like I| OP:NHOMO 1228 OP:NHOMOORG 381 OP:PATTERN -------------------------------------------------------------------- -13-4---111-----------11-9------1222-121---1212-2111323-------11326554------11----5-----2211-2------1--1---3-2--------------------------11133---41-1------------------11-3-------------12---43-42311111-111121112352231111-45-122------28------------------11-1--11----------1------11111111-1------------------------------------132-38-----1-11142--12-22311-2-11----1--41-341331----3-11------8-659--------3333344244A------2123C--HDD8BAHEHDHH11---1252222-1---------9331---2----------------------------------------7777785222266DC32332555A-1----4433-2--31-27I-------23-----------------------2------------------61----------------------------244--2----5----1--21111--2-1---------------52253334445455543-444444535345355455576643111111111111111111172111-121-398898888999---------------227222512-23332462----------5111111227-1111-656----------11131111111111----------------1--------------------------------------------121-14122-2- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 289 STR:RPRED 77.9 SQ:SECSTR ##################################################################################cEEEEEEEEccccccHHHHHHHHHHHHHHHHHTcEEEEEEcTTcHHHHHHHHHHHTTTTEEEEEEccccTTTTHHHHHHHHHTTccEEEEccccccccccEccEEEEEcHHHHHHHHHHHHHHHHcTTcEEEEEEccTTcHHHHHHHHHHHHHHHHHGGTcEEEEEEEcTTcHHHHHHHHHHHHHHcTTccEEEEccHHHHHHHHHHHHHHTccTTccEEEEEEccHHHHHHHHTTcccEEEEccHHHHHHHHHHHHHHHTTcccccEEEEcEEEETTEEEHHHHHHTc DISOP:02AL 1-11, 38-59| PSIPRED cccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHcccHHHHHHHHHccccEEEEEEEcccccHHHHHHHHHHHHHHHHcccEEEEEcccccHHHHHHHHHHHHHccccEEEEEccccHHHHHHHHHHHHccccEEEEEcccccccccccccEEEccHHHHHHHHHHHHHHHccccEEEEEEEcccccHHHHHHHHHHHHHHHHHcccccEEEEEcccccHHHHHHHHHHHHHcccccEEEEEccHHHHHHHHHHHHHHccccccEEEEEEccHHHHHHHHHcccEEEEEccHHHHHHHHHHHHHHHHHccccccEEEcccEEEEcccHHHHHHccc //